Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a2P08122 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a2P08122 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a2P08122 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Col4a2P08122 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a2P08122 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Col4a2P08122 Gm13223-201ENSMUST00000118609 747 ntBASIC14.38□□□□□ -0.11
Col4a2P08122 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.38□□□□□ -0.11
Col4a2P08122 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a2P08122 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Col4a2P08122 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a2P08122 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.38□□□□□ -0.11
Col4a2P08122 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.38□□□□□ -0.11
Col4a2P08122 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Col4a2P08122 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.38□□□□□ -0.11
Col4a2P08122 Gm10154-201ENSMUST00000084445 354 ntBASIC14.38□□□□□ -0.11
Col4a2P08122 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Col4a2P08122 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a2P08122 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.38□□□□□ -0.11
Col4a2P08122 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a2P08122 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Col4a2P08122 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a2P08122 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a2P08122 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a2P08122 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a2P08122 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a2P08122 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.38□□□□□ -0.11
Col4a2P08122 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a2P08122 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a2P08122 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a2P08122 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a2P08122 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a2P08122 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a2P08122 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a2P08122 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a2P08122 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Col4a2P08122 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.38□□□□□ -0.11
Col4a2P08122 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a2P08122 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a2P08122 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a2P08122 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col4a2P08122 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.37□□□□□ -0.11
Col4a2P08122 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col4a2P08122 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col4a2P08122 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.37□□□□□ -0.11
Col4a2P08122 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col4a2P08122 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
Col4a2P08122 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col4a2P08122 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col4a2P08122 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.37□□□□□ -0.11
Col4a2P08122 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col4a2P08122 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Col4a2P08122 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Col4a2P08122 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col4a2P08122 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Col4a2P08122 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col4a2P08122 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col4a2P08122 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col4a2P08122 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Col4a2P08122 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.37□□□□□ -0.11
Col4a2P08122 Gm43438-201ENSMUST00000198133 379 ntBASIC14.37□□□□□ -0.11
Col4a2P08122 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.37□□□□□ -0.11
Col4a2P08122 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.37□□□□□ -0.11
Col4a2P08122 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.37□□□□□ -0.11
Col4a2P08122 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col4a2P08122 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Col4a2P08122 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.37□□□□□ -0.11
Col4a2P08122 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col4a2P08122 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col4a2P08122 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col4a2P08122 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col4a2P08122 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.37□□□□□ -0.11
Col4a2P08122 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col4a2P08122 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col4a2P08122 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a2P08122 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Col4a2P08122 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a2P08122 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a2P08122 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.36□□□□□ -0.11
Col4a2P08122 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a2P08122 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.36□□□□□ -0.11
Col4a2P08122 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.36□□□□□ -0.11
Col4a2P08122 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.36□□□□□ -0.11
Col4a2P08122 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a2P08122 Gm18057-201ENSMUST00000208220 503 ntBASIC14.36□□□□□ -0.11
Col4a2P08122 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a2P08122 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a2P08122 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a2P08122 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a2P08122 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a2P08122 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a2P08122 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Col4a2P08122 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Col4a2P08122 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Col4a2P08122 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a2P08122 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a2P08122 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Col4a2P08122 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a2P08122 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a2P08122 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms