Protein–RNA interactions for Protein: P04212

T-cell receptor beta chain V region LB2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04212 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
P04212 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
P04212 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
P04212 Mir6404-201ENSMUST00000183699 94 ntBASIC12.69□□□□□ -0.38
P04212 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
P04212 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
P04212 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
P04212 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
P04212 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
P04212 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
P04212 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
P04212 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
P04212 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
P04212 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
P04212 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
P04212 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
P04212 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
P04212 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
P04212 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
P04212 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
P04212 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
P04212 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
P04212 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
P04212 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
P04212 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
P04212 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
P04212 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
P04212 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
P04212 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
P04212 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
P04212 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
P04212 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
P04212 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
P04212 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
P04212 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
P04212 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
P04212 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC12.68□□□□□ -0.38
P04212 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
P04212 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
P04212 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
P04212 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
P04212 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
P04212 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
P04212 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
P04212 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
P04212 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
P04212 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
P04212 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
P04212 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
P04212 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
P04212 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
P04212 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.67□□□□□ -0.38
P04212 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
P04212 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
P04212 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
P04212 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
P04212 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
P04212 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
P04212 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
P04212 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
P04212 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
P04212 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
P04212 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
P04212 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC12.67□□□□□ -0.38
P04212 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.67□□□□□ -0.38
P04212 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
P04212 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
P04212 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
P04212 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
P04212 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
P04212 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
P04212 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
P04212 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
P04212 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
P04212 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
P04212 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.66□□□□□ -0.38
P04212 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
P04212 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
P04212 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
P04212 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
P04212 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
P04212 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
P04212 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC12.66□□□□□ -0.38
P04212 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
P04212 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
P04212 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
P04212 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
P04212 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
P04212 Gm6345-202ENSMUST00000180900 204 ntBASIC12.66□□□□□ -0.38
P04212 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
P04212 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
P04212 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
P04212 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
P04212 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
P04212 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
P04212 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.66□□□□□ -0.38
P04212 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
P04212 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
P04212 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
P04212 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms