Protein–RNA interactions for Protein: P03980

Ig heavy chain V region TEPC 1017, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P03980 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P03980 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
P03980 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P03980 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P03980 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P03980 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P03980 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
P03980 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
P03980 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P03980 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P03980 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
P03980 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
P03980 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
P03980 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC12.07□□□□□ -0.48
P03980 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
P03980 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P03980 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC12.07□□□□□ -0.48
P03980 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P03980 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P03980 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P03980 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
P03980 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
P03980 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P03980 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
P03980 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
P03980 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC12.07□□□□□ -0.48
P03980 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
P03980 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
P03980 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
P03980 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
P03980 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
P03980 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
P03980 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
P03980 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
P03980 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.06□□□□□ -0.48
P03980 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
P03980 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
P03980 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
P03980 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
P03980 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC12.06□□□□□ -0.48
P03980 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
P03980 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
P03980 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
P03980 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC12.06□□□□□ -0.48
P03980 Gm13436-201ENSMUST00000120418 567 ntBASIC12.06□□□□□ -0.48
P03980 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC12.06□□□□□ -0.48
P03980 Gm10052-201ENSMUST00000168019 960 ntBASIC12.06□□□□□ -0.48
P03980 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
P03980 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC12.06□□□□□ -0.48
P03980 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
P03980 Gm7729-201ENSMUST00000050143 801 ntBASIC12.06□□□□□ -0.48
P03980 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
P03980 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
P03980 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC12.06□□□□□ -0.48
P03980 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
P03980 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
P03980 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
P03980 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
P03980 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
P03980 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
P03980 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
P03980 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
P03980 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
P03980 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
P03980 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
P03980 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
P03980 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
P03980 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P03980 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P03980 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
P03980 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
P03980 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P03980 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC12.05□□□□□ -0.48
P03980 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P03980 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
P03980 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P03980 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P03980 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
P03980 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P03980 Gm6257-201ENSMUST00000163864 910 ntBASIC12.05□□□□□ -0.48
P03980 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC12.05□□□□□ -0.48
P03980 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
P03980 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC12.05□□□□□ -0.48
P03980 Gm44430-201ENSMUST00000203376 995 ntBASIC12.05□□□□□ -0.48
P03980 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC12.05□□□□□ -0.48
P03980 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
P03980 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC12.05□□□□□ -0.48
P03980 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC12.05□□□□□ -0.48
P03980 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P03980 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
P03980 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
P03980 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P03980 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P03980 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
P03980 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
P03980 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
P03980 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P03980 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P03980 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P03980 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms