Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
P01852 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
P01852 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
P01852 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
P01852 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
P01852 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
P01852 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
P01852 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
P01852 Gm4535-201ENSMUST00000182274 558 ntBASIC14.27□□□□□ -0.13
P01852 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
P01852 Gm6376-201ENSMUST00000209407 580 ntBASIC14.27□□□□□ -0.13
P01852 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.27□□□□□ -0.13
P01852 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
P01852 Gm10355-201ENSMUST00000097146 517 ntBASIC14.27□□□□□ -0.13
P01852 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
P01852 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
P01852 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
P01852 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
P01852 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
P01852 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
P01852 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
P01852 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
P01852 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
P01852 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
P01852 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P01852 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P01852 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
P01852 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P01852 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P01852 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
P01852 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P01852 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.26□□□□□ -0.13
P01852 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P01852 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
P01852 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.26□□□□□ -0.13
P01852 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
P01852 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
P01852 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
P01852 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.26□□□□□ -0.13
P01852 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
P01852 Gm6296-201ENSMUST00000222599 943 ntBASIC14.26□□□□□ -0.13
P01852 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
P01852 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.26□□□□□ -0.13
P01852 Gm7461-201ENSMUST00000058918 827 ntBASIC14.26□□□□□ -0.13
P01852 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
P01852 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P01852 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
P01852 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P01852 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
P01852 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P01852 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P01852 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P01852 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P01852 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
P01852 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
P01852 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P01852 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P01852 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P01852 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.25□□□□□ -0.13
P01852 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P01852 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P01852 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
P01852 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
P01852 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.25□□□□□ -0.13
P01852 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.25□□□□□ -0.13
P01852 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
P01852 Gm11452-201ENSMUST00000122376 690 ntBASIC14.25□□□□□ -0.13
P01852 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.25□□□□□ -0.13
P01852 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.25□□□□□ -0.13
P01852 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.25□□□□□ -0.13
P01852 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.25□□□□□ -0.13
P01852 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.25□□□□□ -0.13
P01852 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P01852 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P01852 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
P01852 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P01852 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
P01852 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P01852 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P01852 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P01852 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P01852 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
P01852 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P01852 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
P01852 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
P01852 Asic1-205ENSMUST00000228185 1818 ntBASIC14.25□□□□□ -0.13
P01852 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
P01852 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
P01852 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
P01852 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
P01852 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
P01852 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.24□□□□□ -0.13
P01852 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
P01852 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
P01852 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
P01852 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
P01852 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
P01852 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
P01852 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.24□□□□□ -0.13
P01852 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms