Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
TcraP01849 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
TcraP01849 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
TcraP01849 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TcraP01849 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TcraP01849 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
TcraP01849 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TcraP01849 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TcraP01849 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TcraP01849 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TcraP01849 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TcraP01849 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
TcraP01849 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TcraP01849 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TcraP01849 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC11.42□□□□□ -0.58
TcraP01849 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TcraP01849 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC11.42□□□□□ -0.58
TcraP01849 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TcraP01849 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
TcraP01849 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TcraP01849 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
TcraP01849 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
TcraP01849 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TcraP01849 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TcraP01849 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TcraP01849 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TcraP01849 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
TcraP01849 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.42□□□□□ -0.58
TcraP01849 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
TcraP01849 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
TcraP01849 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TcraP01849 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TcraP01849 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TcraP01849 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
TcraP01849 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
TcraP01849 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC11.41□□□□□ -0.58
TcraP01849 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TcraP01849 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC11.41□□□□□ -0.58
TcraP01849 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TcraP01849 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC11.41□□□□□ -0.58
TcraP01849 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
TcraP01849 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TcraP01849 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC11.41□□□□□ -0.58
TcraP01849 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
TcraP01849 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TcraP01849 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC11.41□□□□□ -0.58
TcraP01849 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
TcraP01849 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
TcraP01849 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TcraP01849 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
TcraP01849 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TcraP01849 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
TcraP01849 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TcraP01849 Gm37912-201ENSMUST00000191895 3076 ntBASIC11.41□□□□□ -0.58
TcraP01849 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
TcraP01849 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC11.41□□□□□ -0.58
TcraP01849 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TcraP01849 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TcraP01849 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TcraP01849 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TcraP01849 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TcraP01849 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
TcraP01849 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
TcraP01849 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TcraP01849 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TcraP01849 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TcraP01849 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TcraP01849 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
TcraP01849 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TcraP01849 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TcraP01849 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
TcraP01849 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TcraP01849 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC11.4□□□□□ -0.58
TcraP01849 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
TcraP01849 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TcraP01849 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TcraP01849 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
TcraP01849 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
TcraP01849 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
TcraP01849 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
TcraP01849 Gm13168-201ENSMUST00000121771 632 ntBASIC11.4□□□□□ -0.58
TcraP01849 Gm12669-201ENSMUST00000122162 1009 ntBASIC11.4□□□□□ -0.58
TcraP01849 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TcraP01849 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TcraP01849 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TcraP01849 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
TcraP01849 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TcraP01849 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TcraP01849 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TcraP01849 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TcraP01849 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TcraP01849 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TcraP01849 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
TcraP01849 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TcraP01849 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
TcraP01849 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC11.4□□□□□ -0.58
TcraP01849 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
TcraP01849 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
TcraP01849 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
TcraP01849 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms