Protein–RNA interactions for Protein: P01736

T-cell receptor beta chain V region PHDS203 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01736 Gfra2-202ENSMUST00000227633 1480 ntBASIC11.64□□□□□ -0.55
P01736 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
P01736 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
P01736 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
P01736 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
P01736 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC11.64□□□□□ -0.55
P01736 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
P01736 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
P01736 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
P01736 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
P01736 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
P01736 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
P01736 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
P01736 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC11.64□□□□□ -0.55
P01736 Gm12085-201ENSMUST00000119263 940 ntBASIC11.64□□□□□ -0.55
P01736 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
P01736 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
P01736 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC11.64□□□□□ -0.55
P01736 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
P01736 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
P01736 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
P01736 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
P01736 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
P01736 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
P01736 Actl10-202ENSMUST00000226583 1501 ntBASIC11.64□□□□□ -0.55
P01736 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
P01736 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
P01736 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
P01736 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
P01736 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
P01736 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
P01736 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
P01736 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
P01736 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
P01736 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
P01736 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
P01736 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
P01736 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
P01736 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
P01736 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
P01736 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
P01736 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
P01736 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
P01736 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
P01736 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC11.63□□□□□ -0.55
P01736 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC11.63□□□□□ -0.55
P01736 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
P01736 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC11.63□□□□□ -0.55
P01736 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
P01736 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
P01736 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
P01736 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
P01736 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
P01736 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
P01736 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
P01736 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
P01736 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
P01736 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
P01736 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
P01736 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
P01736 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
P01736 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
P01736 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
P01736 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
P01736 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
P01736 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
P01736 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
P01736 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC11.62□□□□□ -0.55
P01736 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
P01736 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
P01736 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
P01736 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
P01736 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
P01736 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
P01736 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
P01736 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
P01736 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
P01736 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
P01736 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
P01736 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
P01736 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
P01736 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
P01736 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
P01736 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC11.62□□□□□ -0.55
P01736 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC11.62□□□□□ -0.55
P01736 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
P01736 Gm37179-201ENSMUST00000194862 823 ntBASIC11.62□□□□□ -0.55
P01736 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
P01736 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
P01736 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
P01736 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
P01736 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
P01736 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
P01736 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
P01736 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
P01736 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
P01736 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
P01736 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
P01736 Gm6190-201ENSMUST00000220683 1374 ntBASIC11.62□□□□□ -0.55
P01736 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms