Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vti1aO89116 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vti1aO89116 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vti1aO89116 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Vti1aO89116 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vti1aO89116 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Vti1aO89116 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vti1aO89116 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vti1aO89116 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vti1aO89116 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vti1aO89116 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.81■□□□□ 0.28
Vti1aO89116 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vti1aO89116 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vti1aO89116 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Vti1aO89116 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Vti1aO89116 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Vti1aO89116 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.81■□□□□ 0.28
Vti1aO89116 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vti1aO89116 Gm14822-201ENSMUST00000122247 291 ntBASIC16.81■□□□□ 0.28
Vti1aO89116 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.81■□□□□ 0.28
Vti1aO89116 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Vti1aO89116 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Vti1aO89116 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC16.81■□□□□ 0.28
Vti1aO89116 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Vti1aO89116 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.81■□□□□ 0.28
Vti1aO89116 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Vti1aO89116 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vti1aO89116 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Vti1aO89116 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.8■□□□□ 0.28
Vti1aO89116 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vti1aO89116 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vti1aO89116 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.8■□□□□ 0.28
Vti1aO89116 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.8■□□□□ 0.28
Vti1aO89116 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vti1aO89116 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Vti1aO89116 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Vti1aO89116 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vti1aO89116 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Vti1aO89116 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Vti1aO89116 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vti1aO89116 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vti1aO89116 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC16.8■□□□□ 0.28
Vti1aO89116 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Vti1aO89116 Gm18622-201ENSMUST00000219361 595 ntBASIC16.8■□□□□ 0.28
Vti1aO89116 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.8■□□□□ 0.28
Vti1aO89116 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Vti1aO89116 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Vti1aO89116 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vti1aO89116 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vti1aO89116 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vti1aO89116 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vti1aO89116 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vti1aO89116 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Vti1aO89116 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Vti1aO89116 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vti1aO89116 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.79■□□□□ 0.28
Vti1aO89116 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vti1aO89116 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vti1aO89116 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vti1aO89116 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Vti1aO89116 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vti1aO89116 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vti1aO89116 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vti1aO89116 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.79■□□□□ 0.28
Vti1aO89116 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.79■□□□□ 0.28
Vti1aO89116 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Vti1aO89116 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.79■□□□□ 0.28
Vti1aO89116 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Vti1aO89116 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Vti1aO89116 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Vti1aO89116 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Vti1aO89116 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Vti1aO89116 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Vti1aO89116 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Vti1aO89116 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vti1aO89116 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vti1aO89116 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vti1aO89116 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vti1aO89116 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vti1aO89116 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vti1aO89116 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vti1aO89116 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vti1aO89116 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vti1aO89116 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.78■□□□□ 0.28
Vti1aO89116 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Vti1aO89116 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vti1aO89116 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Vti1aO89116 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vti1aO89116 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.78■□□□□ 0.28
Vti1aO89116 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Vti1aO89116 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.78■□□□□ 0.28
Vti1aO89116 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Vti1aO89116 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.78■□□□□ 0.28
Vti1aO89116 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.78■□□□□ 0.28
Vti1aO89116 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.78■□□□□ 0.28
Vti1aO89116 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vti1aO89116 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC16.78■□□□□ 0.28
Vti1aO89116 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vti1aO89116 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.78■□□□□ 0.28
Vti1aO89116 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms