Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Gm11355-201ENSMUST00000121120 306 ntBASIC16.13■□□□□ 0.17
CopeO89079 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CopeO89079 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.13■□□□□ 0.17
CopeO89079 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.13■□□□□ 0.17
CopeO89079 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.13■□□□□ 0.17
CopeO89079 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.13■□□□□ 0.17
CopeO89079 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CopeO89079 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.13■□□□□ 0.17
CopeO89079 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CopeO89079 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
CopeO89079 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CopeO89079 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CopeO89079 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CopeO89079 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CopeO89079 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CopeO89079 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CopeO89079 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CopeO89079 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CopeO89079 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CopeO89079 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CopeO89079 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CopeO89079 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.12■□□□□ 0.17
CopeO89079 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.12■□□□□ 0.17
CopeO89079 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CopeO89079 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CopeO89079 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CopeO89079 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.12■□□□□ 0.17
CopeO89079 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CopeO89079 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CopeO89079 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CopeO89079 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CopeO89079 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CopeO89079 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CopeO89079 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CopeO89079 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CopeO89079 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CopeO89079 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
CopeO89079 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CopeO89079 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.11■□□□□ 0.17
CopeO89079 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
CopeO89079 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CopeO89079 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CopeO89079 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CopeO89079 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.11■□□□□ 0.17
CopeO89079 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CopeO89079 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CopeO89079 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CopeO89079 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CopeO89079 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CopeO89079 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CopeO89079 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CopeO89079 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CopeO89079 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CopeO89079 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CopeO89079 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CopeO89079 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CopeO89079 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CopeO89079 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CopeO89079 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CopeO89079 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CopeO89079 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CopeO89079 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CopeO89079 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.1■□□□□ 0.17
CopeO89079 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CopeO89079 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CopeO89079 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
CopeO89079 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.1■□□□□ 0.17
CopeO89079 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CopeO89079 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.1■□□□□ 0.17
CopeO89079 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CopeO89079 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CopeO89079 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.1■□□□□ 0.17
CopeO89079 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CopeO89079 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CopeO89079 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CopeO89079 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CopeO89079 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CopeO89079 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CopeO89079 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CopeO89079 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CopeO89079 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CopeO89079 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CopeO89079 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CopeO89079 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CopeO89079 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CopeO89079 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CopeO89079 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CopeO89079 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CopeO89079 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CopeO89079 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.09■□□□□ 0.17
CopeO89079 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.09■□□□□ 0.17
CopeO89079 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CopeO89079 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CopeO89079 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
CopeO89079 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CopeO89079 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CopeO89079 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CopeO89079 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CopeO89079 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.09■□□□□ 0.17
CopeO89079 Gm22697-201ENSMUST00000175194 63 ntBASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms