Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Syn1O88935 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Syn1O88935 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Syn1O88935 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Syn1O88935 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Syn1O88935 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.01■□□□□ 0.15
Syn1O88935 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Syn1O88935 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.01■□□□□ 0.15
Syn1O88935 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Syn1O88935 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.01■□□□□ 0.15
Syn1O88935 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Syn1O88935 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Syn1O88935 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Syn1O88935 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Syn1O88935 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.01■□□□□ 0.15
Syn1O88935 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Syn1O88935 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Syn1O88935 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Syn1O88935 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC16.01■□□□□ 0.15
Syn1O88935 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC16.01■□□□□ 0.15
Syn1O88935 Gm18057-201ENSMUST00000208220 503 ntBASIC16.01■□□□□ 0.15
Syn1O88935 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC16.01■□□□□ 0.15
Syn1O88935 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Syn1O88935 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Syn1O88935 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Syn1O88935 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
Syn1O88935 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Syn1O88935 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Syn1O88935 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Syn1O88935 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Syn1O88935 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Syn1O88935 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Syn1O88935 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Syn1O88935 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Syn1O88935 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Syn1O88935 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Syn1O88935 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Syn1O88935 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
Syn1O88935 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Syn1O88935 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Syn1O88935 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Syn1O88935 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC16■□□□□ 0.15
Syn1O88935 Gm9385-201ENSMUST00000117563 472 ntBASIC16■□□□□ 0.15
Syn1O88935 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC16■□□□□ 0.15
Syn1O88935 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC16■□□□□ 0.15
Syn1O88935 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC16■□□□□ 0.15
Syn1O88935 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16■□□□□ 0.15
Syn1O88935 AC135669.1-201ENSMUST00000213585 412 ntBASIC16■□□□□ 0.15
Syn1O88935 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC16■□□□□ 0.15
Syn1O88935 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC16■□□□□ 0.15
Syn1O88935 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC16■□□□□ 0.15
Syn1O88935 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Syn1O88935 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Syn1O88935 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Syn1O88935 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Syn1O88935 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Syn1O88935 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Syn1O88935 Gm13410-201ENSMUST00000117058 1415 ntBASIC16■□□□□ 0.15
Syn1O88935 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Syn1O88935 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16■□□□□ 0.15
Syn1O88935 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Syn1O88935 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Syn1O88935 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Syn1O88935 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Syn1O88935 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Syn1O88935 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Syn1O88935 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Syn1O88935 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Syn1O88935 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Syn1O88935 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Syn1O88935 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Syn1O88935 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC15.99■□□□□ 0.15
Syn1O88935 Gm15653-201ENSMUST00000119247 907 ntBASIC15.99■□□□□ 0.15
Syn1O88935 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC15.99■□□□□ 0.15
Syn1O88935 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.99■□□□□ 0.15
Syn1O88935 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC15.99■□□□□ 0.15
Syn1O88935 Gm27306-201ENSMUST00000183970 107 ntBASIC15.99■□□□□ 0.15
Syn1O88935 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.99■□□□□ 0.15
Syn1O88935 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.99■□□□□ 0.15
Syn1O88935 Gm38294-201ENSMUST00000192831 381 ntBASIC15.99■□□□□ 0.15
Syn1O88935 Gm9794-201ENSMUST00000202370 423 ntBASIC15.99■□□□□ 0.15
Syn1O88935 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Syn1O88935 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.99■□□□□ 0.15
Syn1O88935 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Syn1O88935 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Syn1O88935 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Syn1O88935 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Syn1O88935 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Syn1O88935 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Syn1O88935 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Syn1O88935 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.98■□□□□ 0.15
Syn1O88935 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Syn1O88935 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Syn1O88935 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Syn1O88935 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Syn1O88935 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Syn1O88935 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Syn1O88935 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Syn1O88935 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Syn1O88935 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms