Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sh2d1aO88890 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sh2d1aO88890 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
Sh2d1aO88890 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sh2d1aO88890 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh2d1aO88890 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Sh2d1aO88890 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh2d1aO88890 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh2d1aO88890 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh2d1aO88890 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh2d1aO88890 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sh2d1aO88890 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Sh2d1aO88890 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh2d1aO88890 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh2d1aO88890 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sh2d1aO88890 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh2d1aO88890 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC11.07□□□□□ -0.64
Sh2d1aO88890 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC11.07□□□□□ -0.64
Sh2d1aO88890 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sh2d1aO88890 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sh2d1aO88890 CT009713.7-201ENSMUST00000224689 571 ntBASIC11.07□□□□□ -0.64
Sh2d1aO88890 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh2d1aO88890 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Sh2d1aO88890 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh2d1aO88890 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh2d1aO88890 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh2d1aO88890 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh2d1aO88890 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh2d1aO88890 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh2d1aO88890 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh2d1aO88890 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh2d1aO88890 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh2d1aO88890 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh2d1aO88890 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh2d1aO88890 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh2d1aO88890 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh2d1aO88890 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Sh2d1aO88890 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Sh2d1aO88890 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Sh2d1aO88890 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sh2d1aO88890 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC11.06□□□□□ -0.64
Sh2d1aO88890 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Sh2d1aO88890 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh2d1aO88890 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh2d1aO88890 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh2d1aO88890 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC11.06□□□□□ -0.64
Sh2d1aO88890 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh2d1aO88890 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh2d1aO88890 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sh2d1aO88890 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh2d1aO88890 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh2d1aO88890 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Sh2d1aO88890 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh2d1aO88890 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh2d1aO88890 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC11.06□□□□□ -0.64
Sh2d1aO88890 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC11.06□□□□□ -0.64
Sh2d1aO88890 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC11.06□□□□□ -0.64
Sh2d1aO88890 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh2d1aO88890 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sh2d1aO88890 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh2d1aO88890 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh2d1aO88890 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Sh2d1aO88890 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh2d1aO88890 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sh2d1aO88890 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh2d1aO88890 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh2d1aO88890 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh2d1aO88890 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh2d1aO88890 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh2d1aO88890 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh2d1aO88890 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sh2d1aO88890 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sh2d1aO88890 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sh2d1aO88890 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sh2d1aO88890 Rbfox2-206ENSMUST00000227314 1810 ntBASIC11.05□□□□□ -0.64
Sh2d1aO88890 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sh2d1aO88890 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sh2d1aO88890 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Sh2d1aO88890 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sh2d1aO88890 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sh2d1aO88890 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sh2d1aO88890 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC11.05□□□□□ -0.64
Sh2d1aO88890 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Sh2d1aO88890 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC11.05□□□□□ -0.64
Sh2d1aO88890 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC11.05□□□□□ -0.64
Sh2d1aO88890 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sh2d1aO88890 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sh2d1aO88890 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sh2d1aO88890 AC125350.1-201ENSMUST00000225115 903 ntBASIC11.05□□□□□ -0.64
Sh2d1aO88890 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sh2d1aO88890 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sh2d1aO88890 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sh2d1aO88890 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sh2d1aO88890 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sh2d1aO88890 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sh2d1aO88890 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sh2d1aO88890 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sh2d1aO88890 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sh2d1aO88890 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sh2d1aO88890 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms