Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.22■□□□□ 0.03
ClppO88696 Mir5131-201ENSMUST00000175426 93 ntBASIC15.22■□□□□ 0.03
ClppO88696 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.22■□□□□ 0.03
ClppO88696 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.22■□□□□ 0.03
ClppO88696 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ClppO88696 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ClppO88696 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ClppO88696 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ClppO88696 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ClppO88696 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ClppO88696 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
ClppO88696 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ClppO88696 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ClppO88696 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ClppO88696 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ClppO88696 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
ClppO88696 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ClppO88696 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ClppO88696 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ClppO88696 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ClppO88696 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ClppO88696 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ClppO88696 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ClppO88696 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ClppO88696 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ClppO88696 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
ClppO88696 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.21■□□□□ 0.03
ClppO88696 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ClppO88696 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
ClppO88696 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ClppO88696 Gm25406-201ENSMUST00000157599 105 ntBASIC15.21■□□□□ 0.03
ClppO88696 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ClppO88696 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.21■□□□□ 0.03
ClppO88696 Mir5126-201ENSMUST00000175513 77 ntBASIC15.21■□□□□ 0.03
ClppO88696 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.21■□□□□ 0.03
ClppO88696 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.21■□□□□ 0.03
ClppO88696 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.21■□□□□ 0.03
ClppO88696 Gm8655-201ENSMUST00000221159 852 ntBASIC15.21■□□□□ 0.03
ClppO88696 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ClppO88696 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ClppO88696 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ClppO88696 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ClppO88696 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ClppO88696 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ClppO88696 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ClppO88696 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ClppO88696 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ClppO88696 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ClppO88696 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
ClppO88696 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.21■□□□□ 0.02
ClppO88696 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ClppO88696 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ClppO88696 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ClppO88696 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ClppO88696 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ClppO88696 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ClppO88696 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ClppO88696 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ClppO88696 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ClppO88696 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ClppO88696 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.2■□□□□ 0.02
ClppO88696 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ClppO88696 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.2■□□□□ 0.02
ClppO88696 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.2■□□□□ 0.02
ClppO88696 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.2■□□□□ 0.02
ClppO88696 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
ClppO88696 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
ClppO88696 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ClppO88696 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ClppO88696 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ClppO88696 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ClppO88696 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ClppO88696 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ClppO88696 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
ClppO88696 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ClppO88696 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ClppO88696 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ClppO88696 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
ClppO88696 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
ClppO88696 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ClppO88696 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ClppO88696 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ClppO88696 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.19■□□□□ 0.02
ClppO88696 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ClppO88696 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
ClppO88696 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.19■□□□□ 0.02
ClppO88696 Mir6404-201ENSMUST00000183699 94 ntBASIC15.19■□□□□ 0.02
ClppO88696 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.19■□□□□ 0.02
ClppO88696 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.19■□□□□ 0.02
ClppO88696 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ClppO88696 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ClppO88696 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ClppO88696 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ClppO88696 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ClppO88696 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ClppO88696 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ClppO88696 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ClppO88696 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ClppO88696 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ClppO88696 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms