Protein–RNA interactions for Protein: O88520

Shoc2, Leucine-rich repeat protein SHOC-2, mousemouse

Known RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shoc2O88520 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shoc2O88520 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.13■□□□□ 0.17
Shoc2O88520 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Shoc2O88520 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shoc2O88520 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Shoc2O88520 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Shoc2O88520 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shoc2O88520 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shoc2O88520 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.12■□□□□ 0.17
Shoc2O88520 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Shoc2O88520 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Shoc2O88520 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shoc2O88520 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shoc2O88520 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Shoc2O88520 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shoc2O88520 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shoc2O88520 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.12■□□□□ 0.17
Shoc2O88520 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shoc2O88520 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Shoc2O88520 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Shoc2O88520 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shoc2O88520 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.12■□□□□ 0.17
Shoc2O88520 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.12■□□□□ 0.17
Shoc2O88520 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.12■□□□□ 0.17
Shoc2O88520 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.12■□□□□ 0.17
Shoc2O88520 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shoc2O88520 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shoc2O88520 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shoc2O88520 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shoc2O88520 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shoc2O88520 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shoc2O88520 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
Shoc2O88520 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shoc2O88520 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Shoc2O88520 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Shoc2O88520 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Shoc2O88520 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Shoc2O88520 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shoc2O88520 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Shoc2O88520 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.11■□□□□ 0.17
Shoc2O88520 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shoc2O88520 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Shoc2O88520 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.11■□□□□ 0.17
Shoc2O88520 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Shoc2O88520 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Shoc2O88520 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shoc2O88520 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Shoc2O88520 Gm15372-201ENSMUST00000120729 834 ntBASIC16.11■□□□□ 0.17
Shoc2O88520 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shoc2O88520 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.11■□□□□ 0.17
Shoc2O88520 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.11■□□□□ 0.17
Shoc2O88520 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.11■□□□□ 0.17
Shoc2O88520 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Shoc2O88520 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shoc2O88520 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Shoc2O88520 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shoc2O88520 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shoc2O88520 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Shoc2O88520 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.11■□□□□ 0.17
Shoc2O88520 BC037039-201ENSMUST00000192003 2205 ntBASIC16.11■□□□□ 0.17
Shoc2O88520 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shoc2O88520 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shoc2O88520 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Shoc2O88520 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shoc2O88520 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shoc2O88520 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Shoc2O88520 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shoc2O88520 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Shoc2O88520 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shoc2O88520 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shoc2O88520 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shoc2O88520 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Shoc2O88520 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Shoc2O88520 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shoc2O88520 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shoc2O88520 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Shoc2O88520 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Shoc2O88520 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Shoc2O88520 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Shoc2O88520 Gm25745-201ENSMUST00000174945 133 ntBASIC16.1■□□□□ 0.17
Shoc2O88520 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shoc2O88520 Gm17971-201ENSMUST00000190239 806 ntBASIC16.1■□□□□ 0.17
Shoc2O88520 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Shoc2O88520 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shoc2O88520 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shoc2O88520 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Shoc2O88520 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Shoc2O88520 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shoc2O88520 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shoc2O88520 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shoc2O88520 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shoc2O88520 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Shoc2O88520 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shoc2O88520 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
Shoc2O88520 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shoc2O88520 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shoc2O88520 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shoc2O88520 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shoc2O88520 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shoc2O88520 Gm12644-201ENSMUST00000119935 606 ntBASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms