Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC15.09■□□□□ 0.01
Cacna1hO88427 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC15.09■□□□□ 0.01
Cacna1hO88427 Gm37424-201ENSMUST00000191727 561 ntBASIC15.09■□□□□ 0.01
Cacna1hO88427 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cacna1hO88427 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC15.09■□□□□ 0.01
Cacna1hO88427 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cacna1hO88427 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cacna1hO88427 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cacna1hO88427 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cacna1hO88427 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cacna1hO88427 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cacna1hO88427 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Cacna1hO88427 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cacna1hO88427 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cacna1hO88427 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Cacna1hO88427 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cacna1hO88427 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Cacna1hO88427 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cacna1hO88427 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC15.09■□□□□ 0.01
Cacna1hO88427 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cacna1hO88427 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Cacna1hO88427 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cacna1hO88427 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Cacna1hO88427 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cacna1hO88427 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Cacna1hO88427 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cacna1hO88427 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Cacna1hO88427 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Cacna1hO88427 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
Cacna1hO88427 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Cacna1hO88427 Ldb3-207ENSMUST00000227819 1499 ntBASIC15.08■□□□□ 0
Cacna1hO88427 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Cacna1hO88427 Gm7619-201ENSMUST00000210649 1282 ntBASIC15.07■□□□□ 0
Cacna1hO88427 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cacna1hO88427 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cacna1hO88427 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Cacna1hO88427 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cacna1hO88427 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Cacna1hO88427 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cacna1hO88427 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.07■□□□□ 0
Cacna1hO88427 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cacna1hO88427 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cacna1hO88427 Gm42853-201ENSMUST00000201273 1387 ntBASIC15.07■□□□□ 0
Cacna1hO88427 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cacna1hO88427 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cacna1hO88427 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cacna1hO88427 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cacna1hO88427 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC15.07■□□□□ 0
Cacna1hO88427 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC15.07■□□□□ 0
Cacna1hO88427 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cacna1hO88427 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cacna1hO88427 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cacna1hO88427 AC154171.1-201ENSMUST00000224610 643 ntBASIC15.07■□□□□ 0
Cacna1hO88427 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Cacna1hO88427 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cacna1hO88427 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.07■□□□□ 0
Cacna1hO88427 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cacna1hO88427 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cacna1hO88427 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cacna1hO88427 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cacna1hO88427 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cacna1hO88427 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC15.06■□□□□ 0
Cacna1hO88427 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Cacna1hO88427 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cacna1hO88427 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Cacna1hO88427 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cacna1hO88427 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC15.06■□□□□ 0
Cacna1hO88427 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC15.06■□□□□ 0
Cacna1hO88427 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC15.06■□□□□ 0
Cacna1hO88427 Gm20445-201ENSMUST00000061905 565 ntBASIC15.06■□□□□ 0
Cacna1hO88427 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cacna1hO88427 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cacna1hO88427 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cacna1hO88427 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cacna1hO88427 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cacna1hO88427 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Cacna1hO88427 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cacna1hO88427 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Cacna1hO88427 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC15.06■□□□□ 0
Cacna1hO88427 Gm45841-201ENSMUST00000207700 164 ntBASIC15.06■□□□□ 0
Cacna1hO88427 Iqck-206ENSMUST00000208658 2891 ntBASIC15.06■□□□□ 0
Cacna1hO88427 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cacna1hO88427 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cacna1hO88427 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cacna1hO88427 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cacna1hO88427 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cacna1hO88427 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cacna1hO88427 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cacna1hO88427 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cacna1hO88427 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.05■□□□□ 0
Cacna1hO88427 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cacna1hO88427 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC15.05■□□□□ 0
Cacna1hO88427 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC15.05■□□□□ 0
Cacna1hO88427 Gm4959-201ENSMUST00000197271 1044 ntBASIC15.05■□□□□ 0
Cacna1hO88427 Gm18624-201ENSMUST00000220966 658 ntBASIC15.05■□□□□ 0
Cacna1hO88427 AC159006.1-201ENSMUST00000226396 258 ntBASIC15.05■□□□□ 0
Cacna1hO88427 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cacna1hO88427 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
Cacna1hO88427 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
Cacna1hO88427 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms