Protein–RNA interactions for Protein: O88346

Tnnt1, Troponin T, slow skeletal muscle, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnnt1O88346 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tnnt1O88346 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
Tnnt1O88346 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Tnnt1O88346 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tnnt1O88346 Gm27702-201ENSMUST00000184512 56 ntBASIC19.91■□□□□ 0.78
Tnnt1O88346 AC131709.1-201ENSMUST00000224731 1180 ntBASIC19.91■□□□□ 0.78
Tnnt1O88346 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC19.91■□□□□ 0.78
Tnnt1O88346 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tnnt1O88346 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tnnt1O88346 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Tnnt1O88346 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Tnnt1O88346 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tnnt1O88346 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tnnt1O88346 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC19.91■□□□□ 0.78
Tnnt1O88346 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
Tnnt1O88346 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Tnnt1O88346 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tnnt1O88346 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC19.9■□□□□ 0.78
Tnnt1O88346 Gm11764-201ENSMUST00000120221 623 ntBASIC19.9■□□□□ 0.78
Tnnt1O88346 Gm14822-201ENSMUST00000122247 291 ntBASIC19.9■□□□□ 0.78
Tnnt1O88346 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Tnnt1O88346 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC19.9■□□□□ 0.78
Tnnt1O88346 Gm27300-201ENSMUST00000184085 97 ntBASIC19.9■□□□□ 0.78
Tnnt1O88346 Gm27335-201ENSMUST00000184758 97 ntBASIC19.9■□□□□ 0.78
Tnnt1O88346 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tnnt1O88346 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tnnt1O88346 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tnnt1O88346 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tnnt1O88346 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Tnnt1O88346 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tnnt1O88346 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC19.9■□□□□ 0.78
Tnnt1O88346 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tnnt1O88346 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Tnnt1O88346 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tnnt1O88346 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tnnt1O88346 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
Tnnt1O88346 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC19.9■□□□□ 0.78
Tnnt1O88346 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tnnt1O88346 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Tnnt1O88346 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tnnt1O88346 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC19.89■□□□□ 0.77
Tnnt1O88346 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Tnnt1O88346 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Tnnt1O88346 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC19.89■□□□□ 0.77
Tnnt1O88346 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Tnnt1O88346 Gm5253-201ENSMUST00000187104 1025 ntBASIC19.89■□□□□ 0.77
Tnnt1O88346 Gm44729-201ENSMUST00000206759 2052 ntBASIC19.89■□□□□ 0.77
Tnnt1O88346 Bloc1s5-203ENSMUST00000224902 612 ntBASIC19.89■□□□□ 0.77
Tnnt1O88346 AC151836.1-202ENSMUST00000226259 753 ntBASIC19.89■□□□□ 0.77
Tnnt1O88346 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tnnt1O88346 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tnnt1O88346 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tnnt1O88346 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Tnnt1O88346 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tnnt1O88346 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tnnt1O88346 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tnnt1O88346 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Tnnt1O88346 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tnnt1O88346 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tnnt1O88346 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tnnt1O88346 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC19.88■□□□□ 0.77
Tnnt1O88346 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC19.88■□□□□ 0.77
Tnnt1O88346 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Tnnt1O88346 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tnnt1O88346 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tnnt1O88346 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tnnt1O88346 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tnnt1O88346 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tnnt1O88346 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tnnt1O88346 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tnnt1O88346 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tnnt1O88346 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tnnt1O88346 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tnnt1O88346 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tnnt1O88346 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tnnt1O88346 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tnnt1O88346 Gm11873-201ENSMUST00000117877 1304 ntBASIC19.87■□□□□ 0.77
Tnnt1O88346 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC19.87■□□□□ 0.77
Tnnt1O88346 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC19.87■□□□□ 0.77
Tnnt1O88346 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Tnnt1O88346 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC19.87■□□□□ 0.77
Tnnt1O88346 Gm7229-201ENSMUST00000214719 1007 ntBASIC19.87■□□□□ 0.77
Tnnt1O88346 AC225888.1-201ENSMUST00000227184 728 ntBASIC19.87■□□□□ 0.77
Tnnt1O88346 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Tnnt1O88346 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tnnt1O88346 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Tnnt1O88346 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tnnt1O88346 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Tnnt1O88346 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tnnt1O88346 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tnnt1O88346 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Tnnt1O88346 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Tnnt1O88346 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Tnnt1O88346 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tnnt1O88346 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tnnt1O88346 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Tnnt1O88346 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Tnnt1O88346 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tnnt1O88346 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tnnt1O88346 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms