Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Slc4a4O88343 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc4a4O88343 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Slc4a4O88343 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Slc4a4O88343 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc4a4O88343 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC18.37■□□□□ 0.53
Slc4a4O88343 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc4a4O88343 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc4a4O88343 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc4a4O88343 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc4a4O88343 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc4a4O88343 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Slc4a4O88343 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Slc4a4O88343 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
Slc4a4O88343 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC18.37■□□□□ 0.53
Slc4a4O88343 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.37■□□□□ 0.53
Slc4a4O88343 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC18.37■□□□□ 0.53
Slc4a4O88343 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Slc4a4O88343 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc4a4O88343 Gm9682-201ENSMUST00000197505 556 ntBASIC18.37■□□□□ 0.53
Slc4a4O88343 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC18.37■□□□□ 0.53
Slc4a4O88343 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Slc4a4O88343 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC18.37■□□□□ 0.53
Slc4a4O88343 AC151836.1-202ENSMUST00000226259 753 ntBASIC18.37■□□□□ 0.53
Slc4a4O88343 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.37■□□□□ 0.53
Slc4a4O88343 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Slc4a4O88343 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Slc4a4O88343 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC18.37■□□□□ 0.53
Slc4a4O88343 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Slc4a4O88343 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc4a4O88343 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Slc4a4O88343 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc4a4O88343 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc4a4O88343 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Slc4a4O88343 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc4a4O88343 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Slc4a4O88343 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Slc4a4O88343 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc4a4O88343 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Slc4a4O88343 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc4a4O88343 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc4a4O88343 Gm18489-201ENSMUST00000172565 551 ntBASIC18.36■□□□□ 0.53
Slc4a4O88343 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc4a4O88343 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Slc4a4O88343 Gm42670-201ENSMUST00000201816 1292 ntBASIC18.36■□□□□ 0.53
Slc4a4O88343 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc4a4O88343 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Slc4a4O88343 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc4a4O88343 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Slc4a4O88343 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC18.36■□□□□ 0.53
Slc4a4O88343 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc4a4O88343 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc4a4O88343 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc4a4O88343 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc4a4O88343 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc4a4O88343 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc4a4O88343 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc4a4O88343 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc4a4O88343 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc4a4O88343 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Slc4a4O88343 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Slc4a4O88343 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Slc4a4O88343 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Slc4a4O88343 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc4a4O88343 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Slc4a4O88343 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc4a4O88343 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc4a4O88343 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc4a4O88343 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc4a4O88343 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Slc4a4O88343 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Slc4a4O88343 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Slc4a4O88343 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC18.35■□□□□ 0.53
Slc4a4O88343 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC18.35■□□□□ 0.53
Slc4a4O88343 Gm5712-201ENSMUST00000199748 1043 ntBASIC18.35■□□□□ 0.53
Slc4a4O88343 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC18.35■□□□□ 0.53
Slc4a4O88343 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc4a4O88343 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc4a4O88343 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc4a4O88343 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Slc4a4O88343 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc4a4O88343 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc4a4O88343 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc4a4O88343 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc4a4O88343 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC18.34■□□□□ 0.53
Slc4a4O88343 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc4a4O88343 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc4a4O88343 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc4a4O88343 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc4a4O88343 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc4a4O88343 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc4a4O88343 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Slc4a4O88343 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
Slc4a4O88343 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC18.34■□□□□ 0.53
Slc4a4O88343 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC18.34■□□□□ 0.53
Slc4a4O88343 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc4a4O88343 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc4a4O88343 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC18.34■□□□□ 0.53
Slc4a4O88343 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Slc4a4O88343 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms