Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pfdn2O70591 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC13.02□□□□□ -0.33
Pfdn2O70591 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Pfdn2O70591 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pfdn2O70591 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.02□□□□□ -0.33
Pfdn2O70591 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pfdn2O70591 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pfdn2O70591 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pfdn2O70591 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC13.02□□□□□ -0.33
Pfdn2O70591 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Pfdn2O70591 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pfdn2O70591 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pfdn2O70591 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pfdn2O70591 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pfdn2O70591 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pfdn2O70591 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.02□□□□□ -0.33
Pfdn2O70591 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pfdn2O70591 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.02□□□□□ -0.33
Pfdn2O70591 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pfdn2O70591 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pfdn2O70591 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pfdn2O70591 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pfdn2O70591 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pfdn2O70591 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pfdn2O70591 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pfdn2O70591 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pfdn2O70591 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn2O70591 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Pfdn2O70591 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Pfdn2O70591 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn2O70591 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn2O70591 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn2O70591 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Pfdn2O70591 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn2O70591 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn2O70591 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.01□□□□□ -0.33
Pfdn2O70591 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn2O70591 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn2O70591 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn2O70591 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Pfdn2O70591 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn2O70591 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn2O70591 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn2O70591 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn2O70591 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC13.01□□□□□ -0.33
Pfdn2O70591 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn2O70591 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn2O70591 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC13.01□□□□□ -0.33
Pfdn2O70591 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC13.01□□□□□ -0.33
Pfdn2O70591 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn2O70591 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn2O70591 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn2O70591 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn2O70591 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn2O70591 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.01□□□□□ -0.33
Pfdn2O70591 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn2O70591 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn2O70591 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.01□□□□□ -0.33
Pfdn2O70591 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Pfdn2O70591 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn2O70591 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn2O70591 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn2O70591 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn2O70591 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn2O70591 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn2O70591 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pfdn2O70591 Gm45133-201ENSMUST00000207548 2773 ntBASIC13□□□□□ -0.33
Pfdn2O70591 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pfdn2O70591 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pfdn2O70591 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pfdn2O70591 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pfdn2O70591 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pfdn2O70591 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pfdn2O70591 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pfdn2O70591 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pfdn2O70591 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pfdn2O70591 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC13□□□□□ -0.33
Pfdn2O70591 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pfdn2O70591 Gm16042-201ENSMUST00000204813 1247 ntBASIC13□□□□□ -0.33
Pfdn2O70591 AC175538.1-201ENSMUST00000225343 1269 ntBASIC13□□□□□ -0.33
Pfdn2O70591 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pfdn2O70591 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Pfdn2O70591 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pfdn2O70591 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pfdn2O70591 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pfdn2O70591 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pfdn2O70591 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Pfdn2O70591 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Pfdn2O70591 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pfdn2O70591 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Pfdn2O70591 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Pfdn2O70591 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pfdn2O70591 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pfdn2O70591 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pfdn2O70591 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pfdn2O70591 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pfdn2O70591 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13□□□□□ -0.33
Pfdn2O70591 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pfdn2O70591 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn2O70591 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms