Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim3O70209 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim3O70209 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim3O70209 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim3O70209 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim3O70209 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim3O70209 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.16□□□□□ -0.14
Pdlim3O70209 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.16□□□□□ -0.14
Pdlim3O70209 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.16□□□□□ -0.14
Pdlim3O70209 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.16□□□□□ -0.14
Pdlim3O70209 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Pdlim3O70209 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim3O70209 Gm27389-201ENSMUST00000183622 195 ntBASIC14.16□□□□□ -0.14
Pdlim3O70209 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim3O70209 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.16□□□□□ -0.14
Pdlim3O70209 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim3O70209 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim3O70209 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim3O70209 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim3O70209 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.16□□□□□ -0.14
Pdlim3O70209 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim3O70209 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.16□□□□□ -0.14
Pdlim3O70209 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim3O70209 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Pdlim3O70209 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim3O70209 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim3O70209 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Pdlim3O70209 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdlim3O70209 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pdlim3O70209 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdlim3O70209 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdlim3O70209 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdlim3O70209 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdlim3O70209 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.15□□□□□ -0.14
Pdlim3O70209 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pdlim3O70209 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdlim3O70209 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.15□□□□□ -0.14
Pdlim3O70209 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Pdlim3O70209 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pdlim3O70209 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pdlim3O70209 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pdlim3O70209 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.14□□□□□ -0.15
Pdlim3O70209 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pdlim3O70209 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Pdlim3O70209 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pdlim3O70209 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pdlim3O70209 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pdlim3O70209 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Pdlim3O70209 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pdlim3O70209 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pdlim3O70209 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pdlim3O70209 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pdlim3O70209 Gm18959-201ENSMUST00000208954 655 ntBASIC14.14□□□□□ -0.15
Pdlim3O70209 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.14□□□□□ -0.15
Pdlim3O70209 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pdlim3O70209 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Pdlim3O70209 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pdlim3O70209 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Pdlim3O70209 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pdlim3O70209 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.14□□□□□ -0.15
Pdlim3O70209 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pdlim3O70209 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pdlim3O70209 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pdlim3O70209 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pdlim3O70209 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pdlim3O70209 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pdlim3O70209 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pdlim3O70209 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.14□□□□□ -0.15
Pdlim3O70209 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pdlim3O70209 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pdlim3O70209 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pdlim3O70209 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pdlim3O70209 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pdlim3O70209 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pdlim3O70209 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.13□□□□□ -0.15
Pdlim3O70209 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Pdlim3O70209 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Pdlim3O70209 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.13□□□□□ -0.15
Pdlim3O70209 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pdlim3O70209 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.13□□□□□ -0.15
Pdlim3O70209 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pdlim3O70209 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pdlim3O70209 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC14.13□□□□□ -0.15
Pdlim3O70209 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.13□□□□□ -0.15
Pdlim3O70209 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pdlim3O70209 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.13□□□□□ -0.15
Pdlim3O70209 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pdlim3O70209 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.13□□□□□ -0.15
Pdlim3O70209 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pdlim3O70209 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Pdlim3O70209 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pdlim3O70209 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pdlim3O70209 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Pdlim3O70209 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdlim3O70209 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdlim3O70209 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdlim3O70209 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdlim3O70209 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Pdlim3O70209 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Pdlim3O70209 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms