Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC18.99■□□□□ 0.63
Mmp8O70138 Mzt1-203ENSMUST00000227948 952 ntBASIC18.99■□□□□ 0.63
Mmp8O70138 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Mmp8O70138 Asic1-205ENSMUST00000228185 1818 ntBASIC18.99■□□□□ 0.63
Mmp8O70138 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Mmp8O70138 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Mmp8O70138 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Mmp8O70138 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Mmp8O70138 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC18.98■□□□□ 0.63
Mmp8O70138 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp8O70138 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp8O70138 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp8O70138 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC18.98■□□□□ 0.63
Mmp8O70138 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp8O70138 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Mmp8O70138 Gm11764-201ENSMUST00000120221 623 ntBASIC18.98■□□□□ 0.63
Mmp8O70138 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC18.98■□□□□ 0.63
Mmp8O70138 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC18.98■□□□□ 0.63
Mmp8O70138 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp8O70138 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
Mmp8O70138 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Mmp8O70138 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp8O70138 Gm18195-201ENSMUST00000207604 706 ntBASIC18.98■□□□□ 0.63
Mmp8O70138 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.98■□□□□ 0.63
Mmp8O70138 AC147366.1-201ENSMUST00000227671 852 ntBASIC18.98■□□□□ 0.63
Mmp8O70138 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Mmp8O70138 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC18.98■□□□□ 0.63
Mmp8O70138 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC18.98■□□□□ 0.63
Mmp8O70138 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp8O70138 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp8O70138 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp8O70138 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp8O70138 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp8O70138 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp8O70138 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp8O70138 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp8O70138 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp8O70138 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp8O70138 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp8O70138 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp8O70138 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC18.97■□□□□ 0.63
Mmp8O70138 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
Mmp8O70138 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC18.97■□□□□ 0.63
Mmp8O70138 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp8O70138 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp8O70138 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp8O70138 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp8O70138 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp8O70138 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp8O70138 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp8O70138 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC18.97■□□□□ 0.63
Mmp8O70138 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Mmp8O70138 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Mmp8O70138 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp8O70138 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp8O70138 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp8O70138 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp8O70138 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp8O70138 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC18.96■□□□□ 0.63
Mmp8O70138 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Mmp8O70138 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp8O70138 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC18.96■□□□□ 0.63
Mmp8O70138 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp8O70138 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC18.96■□□□□ 0.63
Mmp8O70138 Gm12350-201ENSMUST00000121208 462 ntBASIC18.96■□□□□ 0.63
Mmp8O70138 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp8O70138 Gm18489-201ENSMUST00000172565 551 ntBASIC18.96■□□□□ 0.63
Mmp8O70138 Mir5126-201ENSMUST00000175513 77 ntBASIC18.96■□□□□ 0.63
Mmp8O70138 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Mmp8O70138 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp8O70138 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp8O70138 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp8O70138 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC18.96■□□□□ 0.63
Mmp8O70138 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp8O70138 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp8O70138 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp8O70138 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Mmp8O70138 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Mmp8O70138 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mmp8O70138 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Mmp8O70138 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mmp8O70138 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC18.95■□□□□ 0.62
Mmp8O70138 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mmp8O70138 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Mmp8O70138 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Mmp8O70138 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mmp8O70138 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mmp8O70138 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Mmp8O70138 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mmp8O70138 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mmp8O70138 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Mmp8O70138 Gm13036-201ENSMUST00000117799 748 ntBASIC18.95■□□□□ 0.62
Mmp8O70138 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Mmp8O70138 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC18.95■□□□□ 0.62
Mmp8O70138 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC18.95■□□□□ 0.62
Mmp8O70138 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mmp8O70138 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mmp8O70138 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mmp8O70138 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Mmp8O70138 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms