Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rdh5O55240 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rdh5O55240 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rdh5O55240 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rdh5O55240 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rdh5O55240 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
Rdh5O55240 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rdh5O55240 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.77□□□□□ -0.05
Rdh5O55240 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.77□□□□□ -0.05
Rdh5O55240 Gm7506-201ENSMUST00000207758 815 ntBASIC14.77□□□□□ -0.05
Rdh5O55240 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rdh5O55240 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rdh5O55240 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rdh5O55240 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rdh5O55240 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rdh5O55240 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rdh5O55240 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rdh5O55240 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rdh5O55240 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rdh5O55240 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rdh5O55240 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Rdh5O55240 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rdh5O55240 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rdh5O55240 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Rdh5O55240 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rdh5O55240 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rdh5O55240 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rdh5O55240 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rdh5O55240 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rdh5O55240 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rdh5O55240 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rdh5O55240 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rdh5O55240 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Rdh5O55240 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Rdh5O55240 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.76□□□□□ -0.05
Rdh5O55240 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.76□□□□□ -0.05
Rdh5O55240 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.76□□□□□ -0.05
Rdh5O55240 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Rdh5O55240 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rdh5O55240 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.76□□□□□ -0.05
Rdh5O55240 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.76□□□□□ -0.05
Rdh5O55240 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Rdh5O55240 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.76□□□□□ -0.05
Rdh5O55240 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rdh5O55240 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.76□□□□□ -0.05
Rdh5O55240 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rdh5O55240 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rdh5O55240 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Rdh5O55240 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rdh5O55240 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rdh5O55240 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.76□□□□□ -0.05
Rdh5O55240 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Rdh5O55240 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.76□□□□□ -0.05
Rdh5O55240 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rdh5O55240 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rdh5O55240 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rdh5O55240 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rdh5O55240 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.75□□□□□ -0.05
Rdh5O55240 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rdh5O55240 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rdh5O55240 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rdh5O55240 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Rdh5O55240 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Rdh5O55240 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rdh5O55240 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rdh5O55240 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rdh5O55240 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rdh5O55240 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rdh5O55240 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rdh5O55240 Gm4459-201ENSMUST00000118750 468 ntBASIC14.75□□□□□ -0.05
Rdh5O55240 Gm12644-201ENSMUST00000119935 606 ntBASIC14.75□□□□□ -0.05
Rdh5O55240 Gm12497-201ENSMUST00000138778 237 ntBASIC14.75□□□□□ -0.05
Rdh5O55240 Gm28659-201ENSMUST00000188013 759 ntBASIC14.75□□□□□ -0.05
Rdh5O55240 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.75□□□□□ -0.05
Rdh5O55240 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rdh5O55240 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rdh5O55240 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rdh5O55240 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rdh5O55240 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rdh5O55240 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rdh5O55240 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rdh5O55240 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.75□□□□□ -0.05
Rdh5O55240 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rdh5O55240 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rdh5O55240 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rdh5O55240 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rdh5O55240 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Rdh5O55240 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Rdh5O55240 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rdh5O55240 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rdh5O55240 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Rdh5O55240 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rdh5O55240 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rdh5O55240 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rdh5O55240 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.74□□□□□ -0.05
Rdh5O55240 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rdh5O55240 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rdh5O55240 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rdh5O55240 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rdh5O55240 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms