Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.35□□□□□ -0.43
Pde6dO55057 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6dO55057 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6dO55057 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6dO55057 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Pde6dO55057 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6dO55057 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6dO55057 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6dO55057 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6dO55057 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Pde6dO55057 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6dO55057 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Pde6dO55057 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.34□□□□□ -0.43
Pde6dO55057 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6dO55057 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.34□□□□□ -0.43
Pde6dO55057 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6dO55057 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6dO55057 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6dO55057 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6dO55057 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6dO55057 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Pde6dO55057 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6dO55057 AC124581.1-201ENSMUST00000225416 1399 ntBASIC12.34□□□□□ -0.43
Pde6dO55057 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6dO55057 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6dO55057 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6dO55057 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Pde6dO55057 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.34□□□□□ -0.43
Pde6dO55057 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Pde6dO55057 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6dO55057 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC12.34□□□□□ -0.43
Pde6dO55057 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC12.34□□□□□ -0.43
Pde6dO55057 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6dO55057 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6dO55057 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6dO55057 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6dO55057 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6dO55057 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6dO55057 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Pde6dO55057 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6dO55057 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6dO55057 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6dO55057 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6dO55057 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC12.34□□□□□ -0.43
Pde6dO55057 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6dO55057 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Pde6dO55057 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6dO55057 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6dO55057 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Pde6dO55057 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.33□□□□□ -0.43
Pde6dO55057 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Pde6dO55057 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.43
Pde6dO55057 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Pde6dO55057 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.33□□□□□ -0.44
Pde6dO55057 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pde6dO55057 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pde6dO55057 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pde6dO55057 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pde6dO55057 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.33□□□□□ -0.44
Pde6dO55057 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pde6dO55057 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Pde6dO55057 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC12.33□□□□□ -0.44
Pde6dO55057 Gm12896-201ENSMUST00000118430 226 ntBASIC12.33□□□□□ -0.44
Pde6dO55057 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pde6dO55057 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC12.33□□□□□ -0.44
Pde6dO55057 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pde6dO55057 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pde6dO55057 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pde6dO55057 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Pde6dO55057 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Pde6dO55057 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.33□□□□□ -0.44
Pde6dO55057 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pde6dO55057 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pde6dO55057 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pde6dO55057 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pde6dO55057 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Pde6dO55057 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pde6dO55057 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pde6dO55057 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pde6dO55057 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.32□□□□□ -0.44
Pde6dO55057 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.32□□□□□ -0.44
Pde6dO55057 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pde6dO55057 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Pde6dO55057 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pde6dO55057 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pde6dO55057 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pde6dO55057 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.32□□□□□ -0.44
Pde6dO55057 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pde6dO55057 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Pde6dO55057 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pde6dO55057 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pde6dO55057 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pde6dO55057 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pde6dO55057 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pde6dO55057 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pde6dO55057 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Pde6dO55057 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pde6dO55057 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pde6dO55057 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC12.32□□□□□ -0.44
Pde6dO55057 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms