Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cacna1bO55017 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cacna1bO55017 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Cacna1bO55017 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC15.02■□□□□ -0
Cacna1bO55017 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.02■□□□□ -0
Cacna1bO55017 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cacna1bO55017 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
Cacna1bO55017 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cacna1bO55017 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.02□□□□□ -0.01
Cacna1bO55017 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cacna1bO55017 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cacna1bO55017 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC15.02□□□□□ -0.01
Cacna1bO55017 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cacna1bO55017 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
Cacna1bO55017 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cacna1bO55017 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cacna1bO55017 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cacna1bO55017 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Cacna1bO55017 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cacna1bO55017 Gm22065-201ENSMUST00000103753 110 ntBASIC15.01□□□□□ -0.01
Cacna1bO55017 Gm22066-201ENSMUST00000103761 110 ntBASIC15.01□□□□□ -0.01
Cacna1bO55017 Gm24932-201ENSMUST00000103763 110 ntBASIC15.01□□□□□ -0.01
Cacna1bO55017 Gm24115-201ENSMUST00000103799 110 ntBASIC15.01□□□□□ -0.01
Cacna1bO55017 Gm22190-201ENSMUST00000103827 110 ntBASIC15.01□□□□□ -0.01
Cacna1bO55017 Gm22191-201ENSMUST00000103831 110 ntBASIC15.01□□□□□ -0.01
Cacna1bO55017 Gm24721-201ENSMUST00000103849 110 ntBASIC15.01□□□□□ -0.01
Cacna1bO55017 Gm28018-201ENSMUST00000103869 110 ntBASIC15.01□□□□□ -0.01
Cacna1bO55017 Gm26399-201ENSMUST00000103937 110 ntBASIC15.01□□□□□ -0.01
Cacna1bO55017 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.01□□□□□ -0.01
Cacna1bO55017 Gm12008-201ENSMUST00000117791 755 ntBASIC15.01□□□□□ -0.01
Cacna1bO55017 Rpph1-201ENSMUST00000175096 319 ntBASIC15.01□□□□□ -0.01
Cacna1bO55017 Gm25349-201ENSMUST00000177728 110 ntBASIC15.01□□□□□ -0.01
Cacna1bO55017 Gm23616-201ENSMUST00000177797 110 ntBASIC15.01□□□□□ -0.01
Cacna1bO55017 Gm25871-201ENSMUST00000177816 110 ntBASIC15.01□□□□□ -0.01
Cacna1bO55017 Gm24752-201ENSMUST00000178240 110 ntBASIC15.01□□□□□ -0.01
Cacna1bO55017 Gm24496-201ENSMUST00000178287 110 ntBASIC15.01□□□□□ -0.01
Cacna1bO55017 Gm25649-201ENSMUST00000178476 110 ntBASIC15.01□□□□□ -0.01
Cacna1bO55017 Gm25548-201ENSMUST00000178681 110 ntBASIC15.01□□□□□ -0.01
Cacna1bO55017 Gm23147-201ENSMUST00000178841 110 ntBASIC15.01□□□□□ -0.01
Cacna1bO55017 Gm26095-201ENSMUST00000179270 110 ntBASIC15.01□□□□□ -0.01
Cacna1bO55017 Gm22171-201ENSMUST00000179283 110 ntBASIC15.01□□□□□ -0.01
Cacna1bO55017 Gm23936-201ENSMUST00000179354 110 ntBASIC15.01□□□□□ -0.01
Cacna1bO55017 Gm22619-201ENSMUST00000179516 110 ntBASIC15.01□□□□□ -0.01
Cacna1bO55017 Gm25255-201ENSMUST00000179579 110 ntBASIC15.01□□□□□ -0.01
Cacna1bO55017 Gm24755-201ENSMUST00000179691 110 ntBASIC15.01□□□□□ -0.01
Cacna1bO55017 Gm26506-201ENSMUST00000179692 110 ntBASIC15.01□□□□□ -0.01
Cacna1bO55017 Gm25086-201ENSMUST00000179931 110 ntBASIC15.01□□□□□ -0.01
Cacna1bO55017 Gm23243-201ENSMUST00000180047 110 ntBASIC15.01□□□□□ -0.01
Cacna1bO55017 Gm24659-201ENSMUST00000180212 110 ntBASIC15.01□□□□□ -0.01
Cacna1bO55017 Gm24169-201ENSMUST00000180244 110 ntBASIC15.01□□□□□ -0.01
Cacna1bO55017 Gm23689-201ENSMUST00000180354 110 ntBASIC15.01□□□□□ -0.01
Cacna1bO55017 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1bO55017 Gm27359-201ENSMUST00000184153 110 ntBASIC15.01□□□□□ -0.01
Cacna1bO55017 Gm27785-201ENSMUST00000184268 110 ntBASIC15.01□□□□□ -0.01
Cacna1bO55017 Gm27466-201ENSMUST00000184396 110 ntBASIC15.01□□□□□ -0.01
Cacna1bO55017 Gm27703-201ENSMUST00000184836 110 ntBASIC15.01□□□□□ -0.01
Cacna1bO55017 Gm18057-201ENSMUST00000208220 503 ntBASIC15.01□□□□□ -0.01
Cacna1bO55017 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1bO55017 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1bO55017 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1bO55017 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1bO55017 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Cacna1bO55017 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1bO55017 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1bO55017 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1bO55017 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1bO55017 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1bO55017 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Cacna1bO55017 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Cacna1bO55017 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1bO55017 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1bO55017 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1bO55017 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Cacna1bO55017 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1bO55017 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1bO55017 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1bO55017 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1bO55017 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1bO55017 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC15.01□□□□□ -0.01
Cacna1bO55017 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Cacna1bO55017 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1bO55017 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1bO55017 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1bO55017 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1bO55017 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1bO55017 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1bO55017 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Cacna1bO55017 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1bO55017 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15□□□□□ -0.01
Cacna1bO55017 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1bO55017 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1bO55017 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1bO55017 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1bO55017 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Cacna1bO55017 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1bO55017 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1bO55017 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cacna1bO55017 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cacna1bO55017 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1bO55017 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms