Protein–RNA interactions for Protein: O35874

Slc1a4, Neutral amino acid transporter A, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a4O35874 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Slc1a4O35874 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Slc1a4O35874 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Slc1a4O35874 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc1a4O35874 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc1a4O35874 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc1a4O35874 Grk6-207ENSMUST00000225925 2769 ntBASIC18.3■□□□□ 0.52
Slc1a4O35874 Gm13036-201ENSMUST00000117799 748 ntBASIC18.3■□□□□ 0.52
Slc1a4O35874 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Slc1a4O35874 Gm1401-201ENSMUST00000122048 772 ntBASIC18.3■□□□□ 0.52
Slc1a4O35874 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC18.3■□□□□ 0.52
Slc1a4O35874 Gm2308-201ENSMUST00000166539 1004 ntBASIC18.3■□□□□ 0.52
Slc1a4O35874 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc1a4O35874 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC18.3■□□□□ 0.52
Slc1a4O35874 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Slc1a4O35874 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc1a4O35874 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18.3■□□□□ 0.52
Slc1a4O35874 Gm16011-201ENSMUST00000121567 2662 ntBASIC18.3■□□□□ 0.52
Slc1a4O35874 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc1a4O35874 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc1a4O35874 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
Slc1a4O35874 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc1a4O35874 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc1a4O35874 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC18.29■□□□□ 0.52
Slc1a4O35874 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Slc1a4O35874 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc1a4O35874 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc1a4O35874 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Slc1a4O35874 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc1a4O35874 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc1a4O35874 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc1a4O35874 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc1a4O35874 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC18.29■□□□□ 0.52
Slc1a4O35874 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC18.29■□□□□ 0.52
Slc1a4O35874 Gm5682-201ENSMUST00000173402 505 ntBASIC18.29■□□□□ 0.52
Slc1a4O35874 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc1a4O35874 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC18.29■□□□□ 0.52
Slc1a4O35874 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc1a4O35874 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc1a4O35874 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc1a4O35874 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc1a4O35874 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc1a4O35874 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc1a4O35874 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc1a4O35874 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc1a4O35874 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc1a4O35874 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc1a4O35874 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc1a4O35874 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc1a4O35874 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Slc1a4O35874 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc1a4O35874 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc1a4O35874 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc1a4O35874 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc1a4O35874 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Slc1a4O35874 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Slc1a4O35874 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc1a4O35874 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC18.28■□□□□ 0.52
Slc1a4O35874 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc1a4O35874 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc1a4O35874 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc1a4O35874 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Slc1a4O35874 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc1a4O35874 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Slc1a4O35874 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc1a4O35874 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc1a4O35874 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC18.28■□□□□ 0.52
Slc1a4O35874 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Slc1a4O35874 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Slc1a4O35874 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc1a4O35874 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Slc1a4O35874 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC18.27■□□□□ 0.52
Slc1a4O35874 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc1a4O35874 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc1a4O35874 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
Slc1a4O35874 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc1a4O35874 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc1a4O35874 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Slc1a4O35874 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc1a4O35874 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Slc1a4O35874 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc1a4O35874 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc1a4O35874 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Slc1a4O35874 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc1a4O35874 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC18.27■□□□□ 0.52
Slc1a4O35874 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Slc1a4O35874 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Slc1a4O35874 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC18.27■□□□□ 0.52
Slc1a4O35874 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Slc1a4O35874 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc1a4O35874 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc1a4O35874 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc1a4O35874 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc1a4O35874 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc1a4O35874 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Slc1a4O35874 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Slc1a4O35874 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Slc1a4O35874 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc1a4O35874 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Slc1a4O35874 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms