Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Abca4O35600 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC14.54□□□□□ -0.08
Abca4O35600 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Abca4O35600 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Abca4O35600 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Abca4O35600 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Abca4O35600 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Abca4O35600 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Abca4O35600 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Abca4O35600 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Abca4O35600 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Abca4O35600 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Abca4O35600 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Abca4O35600 AC159747.1-201ENSMUST00000219903 265 ntBASIC14.54□□□□□ -0.08
Abca4O35600 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.54□□□□□ -0.08
Abca4O35600 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.54□□□□□ -0.08
Abca4O35600 Gm20445-201ENSMUST00000061905 565 ntBASIC14.54□□□□□ -0.08
Abca4O35600 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Abca4O35600 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Abca4O35600 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Abca4O35600 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Abca4O35600 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Abca4O35600 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Abca4O35600 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Abca4O35600 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Abca4O35600 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Abca4O35600 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14.53□□□□□ -0.08
Abca4O35600 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Abca4O35600 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Abca4O35600 Gm38241-201ENSMUST00000192641 898 ntBASIC14.53□□□□□ -0.08
Abca4O35600 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.53□□□□□ -0.08
Abca4O35600 AC159896.2-201ENSMUST00000214753 269 ntBASIC14.53□□□□□ -0.08
Abca4O35600 AC154319.1-201ENSMUST00000216330 312 ntBASIC14.53□□□□□ -0.08
Abca4O35600 AL589735.1-201ENSMUST00000224353 270 ntBASIC14.53□□□□□ -0.08
Abca4O35600 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Abca4O35600 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Abca4O35600 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.53□□□□□ -0.08
Abca4O35600 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Abca4O35600 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC14.53□□□□□ -0.08
Abca4O35600 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.53□□□□□ -0.08
Abca4O35600 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Abca4O35600 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Abca4O35600 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Abca4O35600 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Abca4O35600 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Abca4O35600 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Abca4O35600 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.52□□□□□ -0.08
Abca4O35600 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Abca4O35600 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.52□□□□□ -0.08
Abca4O35600 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Abca4O35600 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Abca4O35600 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Abca4O35600 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Abca4O35600 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Abca4O35600 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Abca4O35600 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Abca4O35600 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Abca4O35600 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.52□□□□□ -0.08
Abca4O35600 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.52□□□□□ -0.08
Abca4O35600 Gm27920-201ENSMUST00000183953 96 ntBASIC14.52□□□□□ -0.08
Abca4O35600 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Abca4O35600 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Abca4O35600 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Abca4O35600 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Abca4O35600 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Abca4O35600 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Abca4O35600 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.52□□□□□ -0.09
Abca4O35600 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Abca4O35600 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.52□□□□□ -0.09
Abca4O35600 Gm15806-201ENSMUST00000120696 955 ntBASIC14.52□□□□□ -0.09
Abca4O35600 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.52□□□□□ -0.09
Abca4O35600 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Abca4O35600 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Abca4O35600 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC14.52□□□□□ -0.09
Abca4O35600 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Abca4O35600 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.52□□□□□ -0.09
Abca4O35600 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Abca4O35600 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Abca4O35600 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Abca4O35600 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Abca4O35600 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.51□□□□□ -0.09
Abca4O35600 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.51□□□□□ -0.09
Abca4O35600 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Abca4O35600 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC14.51□□□□□ -0.09
Abca4O35600 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Abca4O35600 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.51□□□□□ -0.09
Abca4O35600 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.51□□□□□ -0.09
Abca4O35600 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Abca4O35600 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Abca4O35600 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Abca4O35600 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Abca4O35600 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.51□□□□□ -0.09
Abca4O35600 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Abca4O35600 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Abca4O35600 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Abca4O35600 Gm27731-201ENSMUST00000185192 107 ntBASIC14.5□□□□□ -0.09
Abca4O35600 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Abca4O35600 Gm15823-201ENSMUST00000064305 670 ntBASIC14.5□□□□□ -0.09
Abca4O35600 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Abca4O35600 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms