Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Gfra3O35118 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Gfra3O35118 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gfra3O35118 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gfra3O35118 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gfra3O35118 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Gfra3O35118 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gfra3O35118 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC13.48□□□□□ -0.25
Gfra3O35118 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gfra3O35118 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gfra3O35118 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gfra3O35118 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Gfra3O35118 Gm1401-201ENSMUST00000122048 772 ntBASIC13.48□□□□□ -0.25
Gfra3O35118 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Gfra3O35118 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Gfra3O35118 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gfra3O35118 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gfra3O35118 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Gfra3O35118 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gfra3O35118 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gfra3O35118 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gfra3O35118 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gfra3O35118 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gfra3O35118 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Gfra3O35118 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.48□□□□□ -0.25
Gfra3O35118 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gfra3O35118 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Gfra3O35118 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gfra3O35118 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Gfra3O35118 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gfra3O35118 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Gfra3O35118 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gfra3O35118 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.47□□□□□ -0.25
Gfra3O35118 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gfra3O35118 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.47□□□□□ -0.25
Gfra3O35118 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gfra3O35118 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gfra3O35118 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Gfra3O35118 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.47□□□□□ -0.25
Gfra3O35118 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.47□□□□□ -0.25
Gfra3O35118 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC13.47□□□□□ -0.25
Gfra3O35118 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gfra3O35118 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gfra3O35118 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gfra3O35118 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Gfra3O35118 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gfra3O35118 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.47□□□□□ -0.25
Gfra3O35118 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Gfra3O35118 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Gfra3O35118 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gfra3O35118 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gfra3O35118 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Gfra3O35118 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.47□□□□□ -0.25
Gfra3O35118 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gfra3O35118 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gfra3O35118 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gfra3O35118 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gfra3O35118 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gfra3O35118 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gfra3O35118 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gfra3O35118 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gfra3O35118 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.46□□□□□ -0.25
Gfra3O35118 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gfra3O35118 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gfra3O35118 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gfra3O35118 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gfra3O35118 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.46□□□□□ -0.25
Gfra3O35118 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gfra3O35118 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.46□□□□□ -0.25
Gfra3O35118 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gfra3O35118 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.46□□□□□ -0.25
Gfra3O35118 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gfra3O35118 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.46□□□□□ -0.25
Gfra3O35118 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Gfra3O35118 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.46□□□□□ -0.25
Gfra3O35118 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Gfra3O35118 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.46□□□□□ -0.25
Gfra3O35118 Gm44044-201ENSMUST00000205178 1089 ntBASIC13.46□□□□□ -0.25
Gfra3O35118 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gfra3O35118 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gfra3O35118 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gfra3O35118 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Gfra3O35118 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gfra3O35118 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.46□□□□□ -0.25
Gfra3O35118 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gfra3O35118 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gfra3O35118 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Gfra3O35118 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gfra3O35118 Grk6-207ENSMUST00000225925 2769 ntBASIC13.46□□□□□ -0.26
Gfra3O35118 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.46□□□□□ -0.26
Gfra3O35118 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Gfra3O35118 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Gfra3O35118 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Gfra3O35118 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gfra3O35118 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gfra3O35118 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Gfra3O35118 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gfra3O35118 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Gfra3O35118 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gfra3O35118 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms