Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hdac1O09106 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hdac1O09106 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC18.57■□□□□ 0.56
Hdac1O09106 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hdac1O09106 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hdac1O09106 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac1O09106 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac1O09106 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac1O09106 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac1O09106 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC18.56■□□□□ 0.56
Hdac1O09106 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac1O09106 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac1O09106 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac1O09106 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac1O09106 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.56■□□□□ 0.56
Hdac1O09106 Gm13312-201ENSMUST00000119631 718 ntBASIC18.56■□□□□ 0.56
Hdac1O09106 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac1O09106 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac1O09106 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC18.56■□□□□ 0.56
Hdac1O09106 Gm5587-201ENSMUST00000206270 674 ntBASIC18.56■□□□□ 0.56
Hdac1O09106 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Hdac1O09106 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac1O09106 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac1O09106 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac1O09106 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC18.56■□□□□ 0.56
Hdac1O09106 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac1O09106 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Hdac1O09106 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
Hdac1O09106 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hdac1O09106 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hdac1O09106 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hdac1O09106 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hdac1O09106 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hdac1O09106 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hdac1O09106 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Hdac1O09106 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hdac1O09106 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hdac1O09106 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Hdac1O09106 Gm30437-201ENSMUST00000206086 1201 ntBASIC18.55■□□□□ 0.56
Hdac1O09106 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.55■□□□□ 0.56
Hdac1O09106 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Hdac1O09106 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hdac1O09106 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hdac1O09106 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hdac1O09106 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Hdac1O09106 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Hdac1O09106 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Hdac1O09106 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hdac1O09106 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hdac1O09106 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hdac1O09106 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hdac1O09106 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hdac1O09106 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Hdac1O09106 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hdac1O09106 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hdac1O09106 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hdac1O09106 Gm14722-201ENSMUST00000118943 689 ntBASIC18.54■□□□□ 0.56
Hdac1O09106 Gm15794-201ENSMUST00000120182 631 ntBASIC18.54■□□□□ 0.56
Hdac1O09106 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Hdac1O09106 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.54■□□□□ 0.56
Hdac1O09106 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
Hdac1O09106 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC18.54■□□□□ 0.56
Hdac1O09106 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Hdac1O09106 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hdac1O09106 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hdac1O09106 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hdac1O09106 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hdac1O09106 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Hdac1O09106 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hdac1O09106 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hdac1O09106 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Hdac1O09106 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hdac1O09106 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Hdac1O09106 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Hdac1O09106 Zkscan3-208ENSMUST00000224820 5398 ntBASIC18.53■□□□□ 0.56
Hdac1O09106 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hdac1O09106 Camk2g-217ENSMUST00000226630 1937 ntBASIC18.53■□□□□ 0.56
Hdac1O09106 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hdac1O09106 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hdac1O09106 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Hdac1O09106 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hdac1O09106 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Hdac1O09106 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18.53■□□□□ 0.56
Hdac1O09106 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC18.53■□□□□ 0.56
Hdac1O09106 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC18.53■□□□□ 0.56
Hdac1O09106 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hdac1O09106 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Hdac1O09106 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Hdac1O09106 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Hdac1O09106 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hdac1O09106 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hdac1O09106 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hdac1O09106 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hdac1O09106 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hdac1O09106 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hdac1O09106 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.52■□□□□ 0.56
Hdac1O09106 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Hdac1O09106 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Hdac1O09106 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hdac1O09106 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms