Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trove2O08848 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Trove2O08848 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.04■□□□□ 0.16
Trove2O08848 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trove2O08848 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trove2O08848 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trove2O08848 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Trove2O08848 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trove2O08848 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trove2O08848 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trove2O08848 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trove2O08848 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trove2O08848 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trove2O08848 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trove2O08848 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trove2O08848 Gm38058-201ENSMUST00000194323 4368 ntBASIC16.03■□□□□ 0.16
Trove2O08848 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trove2O08848 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trove2O08848 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trove2O08848 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trove2O08848 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Trove2O08848 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Trove2O08848 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.03■□□□□ 0.16
Trove2O08848 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.03■□□□□ 0.16
Trove2O08848 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trove2O08848 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trove2O08848 Gm27389-201ENSMUST00000183622 195 ntBASIC16.03■□□□□ 0.16
Trove2O08848 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.03■□□□□ 0.16
Trove2O08848 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.03■□□□□ 0.16
Trove2O08848 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Trove2O08848 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trove2O08848 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trove2O08848 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Trove2O08848 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trove2O08848 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC16.03■□□□□ 0.16
Trove2O08848 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trove2O08848 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trove2O08848 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trove2O08848 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trove2O08848 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trove2O08848 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC16.03■□□□□ 0.16
Trove2O08848 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trove2O08848 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trove2O08848 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trove2O08848 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trove2O08848 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trove2O08848 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trove2O08848 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trove2O08848 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trove2O08848 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Trove2O08848 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trove2O08848 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trove2O08848 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trove2O08848 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trove2O08848 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.02■□□□□ 0.16
Trove2O08848 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
Trove2O08848 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trove2O08848 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trove2O08848 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trove2O08848 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trove2O08848 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.02■□□□□ 0.16
Trove2O08848 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trove2O08848 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trove2O08848 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trove2O08848 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trove2O08848 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trove2O08848 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.02■□□□□ 0.16
Trove2O08848 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trove2O08848 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trove2O08848 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trove2O08848 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trove2O08848 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trove2O08848 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trove2O08848 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trove2O08848 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trove2O08848 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.01■□□□□ 0.15
Trove2O08848 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trove2O08848 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trove2O08848 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Trove2O08848 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trove2O08848 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trove2O08848 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trove2O08848 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trove2O08848 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trove2O08848 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
Trove2O08848 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Trove2O08848 Gm11336-201ENSMUST00000118168 334 ntBASIC16.01■□□□□ 0.15
Trove2O08848 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.01■□□□□ 0.15
Trove2O08848 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trove2O08848 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trove2O08848 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trove2O08848 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Trove2O08848 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trove2O08848 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trove2O08848 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trove2O08848 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trove2O08848 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Trove2O08848 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trove2O08848 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.01■□□□□ 0.15
Trove2O08848 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms