Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Nkx1-1G3UXB3 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx1-1G3UXB3 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC17.92■□□□□ 0.46
Nkx1-1G3UXB3 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx1-1G3UXB3 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx1-1G3UXB3 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx1-1G3UXB3 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx1-1G3UXB3 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx1-1G3UXB3 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx1-1G3UXB3 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx1-1G3UXB3 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx1-1G3UXB3 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx1-1G3UXB3 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx1-1G3UXB3 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Nkx1-1G3UXB3 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx1-1G3UXB3 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx1-1G3UXB3 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx1-1G3UXB3 Mir669l-201ENSMUST00000103771 98 ntBASIC17.91■□□□□ 0.46
Nkx1-1G3UXB3 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Nkx1-1G3UXB3 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.91■□□□□ 0.46
Nkx1-1G3UXB3 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Nkx1-1G3UXB3 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Nkx1-1G3UXB3 Ackr1-202ENSMUST00000194046 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx1-1G3UXB3 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Nkx1-1G3UXB3 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC17.91■□□□□ 0.46
Nkx1-1G3UXB3 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx1-1G3UXB3 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx1-1G3UXB3 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx1-1G3UXB3 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx1-1G3UXB3 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx1-1G3UXB3 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx1-1G3UXB3 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.91■□□□□ 0.46
Nkx1-1G3UXB3 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx1-1G3UXB3 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Nkx1-1G3UXB3 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx1-1G3UXB3 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx1-1G3UXB3 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx1-1G3UXB3 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx1-1G3UXB3 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx1-1G3UXB3 Ifna13-201ENSMUST00000105149 819 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Nkx1-1G3UXB3 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx1-1G3UXB3 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx1-1G3UXB3 Gm8344-201ENSMUST00000119813 856 ntBASIC17.9■□□□□ 0.46
Nkx1-1G3UXB3 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC17.9■□□□□ 0.46
Nkx1-1G3UXB3 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC17.9■□□□□ 0.46
Nkx1-1G3UXB3 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC17.9■□□□□ 0.46
Nkx1-1G3UXB3 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx1-1G3UXB3 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Nkx1-1G3UXB3 Gm22693-201ENSMUST00000175049 442 ntBASIC17.9■□□□□ 0.46
Nkx1-1G3UXB3 Gm27838-201ENSMUST00000184829 128 ntBASIC17.9■□□□□ 0.46
Nkx1-1G3UXB3 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC17.9■□□□□ 0.46
Nkx1-1G3UXB3 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx1-1G3UXB3 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Nkx1-1G3UXB3 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Nkx1-1G3UXB3 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Nkx1-1G3UXB3 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx1-1G3UXB3 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx1-1G3UXB3 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx1-1G3UXB3 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx1-1G3UXB3 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx1-1G3UXB3 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.89■□□□□ 0.46
Nkx1-1G3UXB3 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.89■□□□□ 0.45
Nkx1-1G3UXB3 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx1-1G3UXB3 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx1-1G3UXB3 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx1-1G3UXB3 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx1-1G3UXB3 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx1-1G3UXB3 Gm12742-201ENSMUST00000117326 410 ntBASIC17.89■□□□□ 0.45
Nkx1-1G3UXB3 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC17.89■□□□□ 0.45
Nkx1-1G3UXB3 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
Nkx1-1G3UXB3 Gm12091-201ENSMUST00000146791 830 ntBASIC17.89■□□□□ 0.45
Nkx1-1G3UXB3 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC17.89■□□□□ 0.45
Nkx1-1G3UXB3 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx1-1G3UXB3 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Nkx1-1G3UXB3 Rbfox2-208ENSMUST00000227930 1218 ntBASIC17.89■□□□□ 0.45
Nkx1-1G3UXB3 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx1-1G3UXB3 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx1-1G3UXB3 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx1-1G3UXB3 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx1-1G3UXB3 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx1-1G3UXB3 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx1-1G3UXB3 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx1-1G3UXB3 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx1-1G3UXB3 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx1-1G3UXB3 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx1-1G3UXB3 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx1-1G3UXB3 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Nkx1-1G3UXB3 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx1-1G3UXB3 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
Nkx1-1G3UXB3 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx1-1G3UXB3 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Nkx1-1G3UXB3 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC17.88■□□□□ 0.45
Nkx1-1G3UXB3 Gm28439-201ENSMUST00000187714 876 ntBASIC17.88■□□□□ 0.45
Nkx1-1G3UXB3 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx1-1G3UXB3 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC17.88■□□□□ 0.45
Nkx1-1G3UXB3 Mir670hg-205ENSMUST00000210851 1148 ntTSL 5 BASIC17.88■□□□□ 0.45
Nkx1-1G3UXB3 Gm9908-201ENSMUST00000211534 448 ntBASIC17.88■□□□□ 0.45
Nkx1-1G3UXB3 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx1-1G3UXB3 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx1-1G3UXB3 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms