Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh17E9PXF0 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh17E9PXF0 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh17E9PXF0 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Pcdh17E9PXF0 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh17E9PXF0 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh17E9PXF0 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Pcdh17E9PXF0 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh17E9PXF0 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh17E9PXF0 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh17E9PXF0 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh17E9PXF0 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Pcdh17E9PXF0 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh17E9PXF0 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh17E9PXF0 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh17E9PXF0 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh17E9PXF0 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.51□□□□□ -0.09
Pcdh17E9PXF0 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Pcdh17E9PXF0 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh17E9PXF0 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.51□□□□□ -0.09
Pcdh17E9PXF0 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh17E9PXF0 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh17E9PXF0 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh17E9PXF0 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.51□□□□□ -0.09
Pcdh17E9PXF0 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh17E9PXF0 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh17E9PXF0 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh17E9PXF0 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
Pcdh17E9PXF0 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh17E9PXF0 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh17E9PXF0 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.51□□□□□ -0.09
Pcdh17E9PXF0 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh17E9PXF0 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Pcdh17E9PXF0 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh17E9PXF0 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh17E9PXF0 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh17E9PXF0 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh17E9PXF0 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh17E9PXF0 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh17E9PXF0 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh17E9PXF0 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.5□□□□□ -0.09
Pcdh17E9PXF0 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh17E9PXF0 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh17E9PXF0 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh17E9PXF0 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh17E9PXF0 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
Pcdh17E9PXF0 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh17E9PXF0 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh17E9PXF0 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
Pcdh17E9PXF0 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh17E9PXF0 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh17E9PXF0 Gm14494-201ENSMUST00000118786 435 ntBASIC14.5□□□□□ -0.09
Pcdh17E9PXF0 Gm11764-201ENSMUST00000120221 623 ntBASIC14.5□□□□□ -0.09
Pcdh17E9PXF0 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.5□□□□□ -0.09
Pcdh17E9PXF0 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Pcdh17E9PXF0 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh17E9PXF0 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Pcdh17E9PXF0 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh17E9PXF0 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Pcdh17E9PXF0 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh17E9PXF0 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh17E9PXF0 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh17E9PXF0 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Pcdh17E9PXF0 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh17E9PXF0 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh17E9PXF0 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh17E9PXF0 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.5□□□□□ -0.09
Pcdh17E9PXF0 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh17E9PXF0 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh17E9PXF0 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Pcdh17E9PXF0 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Pcdh17E9PXF0 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Pcdh17E9PXF0 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Pcdh17E9PXF0 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh17E9PXF0 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh17E9PXF0 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh17E9PXF0 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh17E9PXF0 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh17E9PXF0 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh17E9PXF0 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh17E9PXF0 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Pcdh17E9PXF0 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Pcdh17E9PXF0 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh17E9PXF0 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh17E9PXF0 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.49□□□□□ -0.09
Pcdh17E9PXF0 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh17E9PXF0 Gm5682-201ENSMUST00000173402 505 ntBASIC14.49□□□□□ -0.09
Pcdh17E9PXF0 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh17E9PXF0 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh17E9PXF0 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh17E9PXF0 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh17E9PXF0 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh17E9PXF0 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh17E9PXF0 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh17E9PXF0 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.49□□□□□ -0.09
Pcdh17E9PXF0 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh17E9PXF0 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.49□□□□□ -0.09
Pcdh17E9PXF0 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Pcdh17E9PXF0 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh17E9PXF0 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms