Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm28043E0CXC2 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm28043E0CXC2 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
Gm28043E0CXC2 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Gm28043E0CXC2 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gm28043E0CXC2 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gm28043E0CXC2 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gm28043E0CXC2 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.68■□□□□ 0.1
Gm28043E0CXC2 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Gm28043E0CXC2 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gm28043E0CXC2 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gm28043E0CXC2 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Gm28043E0CXC2 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Gm28043E0CXC2 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gm28043E0CXC2 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gm28043E0CXC2 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Gm28043E0CXC2 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gm28043E0CXC2 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Gm28043E0CXC2 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gm28043E0CXC2 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Gm28043E0CXC2 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Gm28043E0CXC2 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gm28043E0CXC2 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Gm28043E0CXC2 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Gm28043E0CXC2 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gm28043E0CXC2 Gm6623-201ENSMUST00000173570 544 ntBASIC15.68■□□□□ 0.1
Gm28043E0CXC2 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Gm28043E0CXC2 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.68■□□□□ 0.1
Gm28043E0CXC2 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Gm28043E0CXC2 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gm28043E0CXC2 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gm28043E0CXC2 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gm28043E0CXC2 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gm28043E0CXC2 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.68■□□□□ 0.1
Gm28043E0CXC2 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Gm28043E0CXC2 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Gm28043E0CXC2 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.68■□□□□ 0.1
Gm28043E0CXC2 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gm28043E0CXC2 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Gm28043E0CXC2 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.68■□□□□ 0.1
Gm28043E0CXC2 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gm28043E0CXC2 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gm28043E0CXC2 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.68■□□□□ 0.1
Gm28043E0CXC2 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm28043E0CXC2 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm28043E0CXC2 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm28043E0CXC2 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.67■□□□□ 0.1
Gm28043E0CXC2 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm28043E0CXC2 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.67■□□□□ 0.1
Gm28043E0CXC2 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm28043E0CXC2 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm28043E0CXC2 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Gm28043E0CXC2 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Gm28043E0CXC2 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm28043E0CXC2 Gm11950-201ENSMUST00000121615 838 ntBASIC15.67■□□□□ 0.1
Gm28043E0CXC2 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm28043E0CXC2 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.67■□□□□ 0.1
Gm28043E0CXC2 Gm29518-201ENSMUST00000190858 372 ntBASIC15.67■□□□□ 0.1
Gm28043E0CXC2 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.67■□□□□ 0.1
Gm28043E0CXC2 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Gm28043E0CXC2 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm28043E0CXC2 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm28043E0CXC2 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm28043E0CXC2 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm28043E0CXC2 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Gm28043E0CXC2 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm28043E0CXC2 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm28043E0CXC2 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Gm28043E0CXC2 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm28043E0CXC2 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Gm28043E0CXC2 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm28043E0CXC2 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm28043E0CXC2 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm28043E0CXC2 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm28043E0CXC2 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm28043E0CXC2 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Gm28043E0CXC2 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Gm28043E0CXC2 Gm17808-201ENSMUST00000200859 894 ntBASIC15.66■□□□□ 0.1
Gm28043E0CXC2 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm28043E0CXC2 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Gm28043E0CXC2 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm28043E0CXC2 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Gm28043E0CXC2 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.66■□□□□ 0.1
Gm28043E0CXC2 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm28043E0CXC2 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Gm28043E0CXC2 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm28043E0CXC2 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Gm28043E0CXC2 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Gm28043E0CXC2 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm28043E0CXC2 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm28043E0CXC2 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm28043E0CXC2 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Gm28043E0CXC2 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm28043E0CXC2 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Gm28043E0CXC2 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Gm28043E0CXC2 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.65■□□□□ 0.1
Gm28043E0CXC2 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm28043E0CXC2 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Gm28043E0CXC2 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm28043E0CXC2 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms