Protein–RNA interactions for Protein: B2RT89

Slc22a28, Predicted gene, EG434674, mousemouse

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc22a28B2RT89 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc22a28B2RT89 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Slc22a28B2RT89 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc22a28B2RT89 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc22a28B2RT89 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc22a28B2RT89 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc22a28B2RT89 Sybu-209ENSMUST00000228639 4113 ntBASIC14.4□□□□□ -0.1
Slc22a28B2RT89 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc22a28B2RT89 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.4□□□□□ -0.1
Slc22a28B2RT89 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Slc22a28B2RT89 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc22a28B2RT89 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Slc22a28B2RT89 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.39□□□□□ -0.11
Slc22a28B2RT89 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc22a28B2RT89 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.39□□□□□ -0.11
Slc22a28B2RT89 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc22a28B2RT89 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Slc22a28B2RT89 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc22a28B2RT89 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc22a28B2RT89 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc22a28B2RT89 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc22a28B2RT89 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc22a28B2RT89 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc22a28B2RT89 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Slc22a28B2RT89 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Slc22a28B2RT89 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Slc22a28B2RT89 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Slc22a28B2RT89 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Slc22a28B2RT89 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc22a28B2RT89 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc22a28B2RT89 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc22a28B2RT89 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc22a28B2RT89 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Slc22a28B2RT89 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc22a28B2RT89 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc22a28B2RT89 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc22a28B2RT89 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.39□□□□□ -0.11
Slc22a28B2RT89 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc22a28B2RT89 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc22a28B2RT89 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc22a28B2RT89 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.38□□□□□ -0.11
Slc22a28B2RT89 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc22a28B2RT89 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc22a28B2RT89 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc22a28B2RT89 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Slc22a28B2RT89 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Slc22a28B2RT89 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc22a28B2RT89 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc22a28B2RT89 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc22a28B2RT89 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc22a28B2RT89 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Slc22a28B2RT89 Mir6982-201ENSMUST00000184354 68 ntBASIC14.38□□□□□ -0.11
Slc22a28B2RT89 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc22a28B2RT89 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc22a28B2RT89 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc22a28B2RT89 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Slc22a28B2RT89 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc22a28B2RT89 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Slc22a28B2RT89 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc22a28B2RT89 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.38□□□□□ -0.11
Slc22a28B2RT89 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc22a28B2RT89 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc22a28B2RT89 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Slc22a28B2RT89 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc22a28B2RT89 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc22a28B2RT89 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc22a28B2RT89 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.37□□□□□ -0.11
Slc22a28B2RT89 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Slc22a28B2RT89 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Slc22a28B2RT89 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Slc22a28B2RT89 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.37□□□□□ -0.11
Slc22a28B2RT89 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc22a28B2RT89 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc22a28B2RT89 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc22a28B2RT89 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.37□□□□□ -0.11
Slc22a28B2RT89 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc22a28B2RT89 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.37□□□□□ -0.11
Slc22a28B2RT89 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc22a28B2RT89 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Slc22a28B2RT89 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc22a28B2RT89 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Slc22a28B2RT89 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc22a28B2RT89 Gm6345-202ENSMUST00000180900 204 ntBASIC14.37□□□□□ -0.11
Slc22a28B2RT89 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.37□□□□□ -0.11
Slc22a28B2RT89 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.37□□□□□ -0.11
Slc22a28B2RT89 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Slc22a28B2RT89 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.37□□□□□ -0.11
Slc22a28B2RT89 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc22a28B2RT89 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.37□□□□□ -0.11
Slc22a28B2RT89 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc22a28B2RT89 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc22a28B2RT89 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc22a28B2RT89 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Slc22a28B2RT89 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc22a28B2RT89 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Slc22a28B2RT89 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc22a28B2RT89 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc22a28B2RT89 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Slc22a28B2RT89 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Slc22a28B2RT89 Gm14722-201ENSMUST00000118943 689 ntBASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms