Protein–RNA interactions for Protein: B2RRD7

Brpf1, Peregrin, mousemouse

Predictions only

Length 1,212 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brpf1B2RRD7 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Brpf1B2RRD7 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Brpf1B2RRD7 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Brpf1B2RRD7 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Brpf1B2RRD7 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC19.42■□□□□ 0.7
Brpf1B2RRD7 Gm42670-201ENSMUST00000201816 1292 ntBASIC19.42■□□□□ 0.7
Brpf1B2RRD7 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC19.42■□□□□ 0.7
Brpf1B2RRD7 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Brpf1B2RRD7 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Brpf1B2RRD7 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Brpf1B2RRD7 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Brpf1B2RRD7 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Brpf1B2RRD7 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Brpf1B2RRD7 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Brpf1B2RRD7 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Brpf1B2RRD7 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Brpf1B2RRD7 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Brpf1B2RRD7 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
Brpf1B2RRD7 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Brpf1B2RRD7 Gm15173-201ENSMUST00000122049 433 ntBASIC19.41■□□□□ 0.7
Brpf1B2RRD7 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Brpf1B2RRD7 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC19.41■□□□□ 0.7
Brpf1B2RRD7 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC19.41■□□□□ 0.7
Brpf1B2RRD7 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Brpf1B2RRD7 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Brpf1B2RRD7 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Brpf1B2RRD7 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Brpf1B2RRD7 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Brpf1B2RRD7 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Brpf1B2RRD7 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Brpf1B2RRD7 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Brpf1B2RRD7 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Brpf1B2RRD7 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Brpf1B2RRD7 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Brpf1B2RRD7 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Brpf1B2RRD7 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Brpf1B2RRD7 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC19.4■□□□□ 0.7
Brpf1B2RRD7 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Brpf1B2RRD7 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Brpf1B2RRD7 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Brpf1B2RRD7 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Brpf1B2RRD7 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC19.4■□□□□ 0.7
Brpf1B2RRD7 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Brpf1B2RRD7 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Brpf1B2RRD7 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Brpf1B2RRD7 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Brpf1B2RRD7 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC19.4■□□□□ 0.7
Brpf1B2RRD7 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Brpf1B2RRD7 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Brpf1B2RRD7 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Brpf1B2RRD7 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Brpf1B2RRD7 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Brpf1B2RRD7 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Brpf1B2RRD7 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Brpf1B2RRD7 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Brpf1B2RRD7 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Brpf1B2RRD7 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Brpf1B2RRD7 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Brpf1B2RRD7 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC19.39■□□□□ 0.7
Brpf1B2RRD7 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Brpf1B2RRD7 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Brpf1B2RRD7 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Brpf1B2RRD7 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Brpf1B2RRD7 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Brpf1B2RRD7 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Brpf1B2RRD7 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Brpf1B2RRD7 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC19.39■□□□□ 0.69
Brpf1B2RRD7 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Brpf1B2RRD7 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC19.39■□□□□ 0.69
Brpf1B2RRD7 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Brpf1B2RRD7 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Brpf1B2RRD7 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Brpf1B2RRD7 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Brpf1B2RRD7 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Brpf1B2RRD7 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Brpf1B2RRD7 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Brpf1B2RRD7 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Brpf1B2RRD7 AC154527.4-201ENSMUST00000224364 1667 ntBASIC19.39■□□□□ 0.69
Brpf1B2RRD7 Gm19430-201ENSMUST00000193847 2137 ntBASIC19.39■□□□□ 0.69
Brpf1B2RRD7 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Brpf1B2RRD7 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC19.38■□□□□ 0.69
Brpf1B2RRD7 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Brpf1B2RRD7 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Brpf1B2RRD7 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Brpf1B2RRD7 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Brpf1B2RRD7 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Brpf1B2RRD7 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Brpf1B2RRD7 Gm14057-201ENSMUST00000120631 482 ntBASIC19.38■□□□□ 0.69
Brpf1B2RRD7 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Brpf1B2RRD7 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC19.38■□□□□ 0.69
Brpf1B2RRD7 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC19.38■□□□□ 0.69
Brpf1B2RRD7 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC19.38■□□□□ 0.69
Brpf1B2RRD7 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Brpf1B2RRD7 Gm37500-201ENSMUST00000192059 1443 ntBASIC19.38■□□□□ 0.69
Brpf1B2RRD7 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC19.38■□□□□ 0.69
Brpf1B2RRD7 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Brpf1B2RRD7 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Brpf1B2RRD7 AC225888.1-201ENSMUST00000227184 728 ntBASIC19.38■□□□□ 0.69
Brpf1B2RRD7 AC117588.1-201ENSMUST00000228510 999 ntBASIC19.38■□□□□ 0.69
Brpf1B2RRD7 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms