Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scn7aB1AYL1 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Scn7aB1AYL1 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC19.93■□□□□ 0.78
Scn7aB1AYL1 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC19.93■□□□□ 0.78
Scn7aB1AYL1 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scn7aB1AYL1 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn7aB1AYL1 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn7aB1AYL1 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn7aB1AYL1 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn7aB1AYL1 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn7aB1AYL1 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC19.92■□□□□ 0.78
Scn7aB1AYL1 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn7aB1AYL1 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Scn7aB1AYL1 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn7aB1AYL1 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Scn7aB1AYL1 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn7aB1AYL1 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn7aB1AYL1 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn7aB1AYL1 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Scn7aB1AYL1 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Scn7aB1AYL1 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn7aB1AYL1 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Scn7aB1AYL1 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn7aB1AYL1 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn7aB1AYL1 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Scn7aB1AYL1 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn7aB1AYL1 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Scn7aB1AYL1 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn7aB1AYL1 Gm12151-201ENSMUST00000121374 290 ntBASIC19.91■□□□□ 0.78
Scn7aB1AYL1 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC19.91■□□□□ 0.78
Scn7aB1AYL1 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Scn7aB1AYL1 Gm8116-201ENSMUST00000182917 1201 ntBASIC19.91■□□□□ 0.78
Scn7aB1AYL1 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.91■□□□□ 0.78
Scn7aB1AYL1 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Scn7aB1AYL1 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Scn7aB1AYL1 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn7aB1AYL1 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
Scn7aB1AYL1 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Scn7aB1AYL1 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Scn7aB1AYL1 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC19.91■□□□□ 0.78
Scn7aB1AYL1 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Scn7aB1AYL1 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Scn7aB1AYL1 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn7aB1AYL1 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Scn7aB1AYL1 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn7aB1AYL1 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Scn7aB1AYL1 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn7aB1AYL1 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn7aB1AYL1 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn7aB1AYL1 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn7aB1AYL1 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn7aB1AYL1 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn7aB1AYL1 Gm11543-201ENSMUST00000120758 370 ntBASIC19.9■□□□□ 0.78
Scn7aB1AYL1 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Scn7aB1AYL1 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Scn7aB1AYL1 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC19.9■□□□□ 0.78
Scn7aB1AYL1 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn7aB1AYL1 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn7aB1AYL1 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Scn7aB1AYL1 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn7aB1AYL1 Gm13823-201ENSMUST00000119930 345 ntBASIC19.89■□□□□ 0.77
Scn7aB1AYL1 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Scn7aB1AYL1 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
Scn7aB1AYL1 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
Scn7aB1AYL1 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC19.89■□□□□ 0.77
Scn7aB1AYL1 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC19.89■□□□□ 0.77
Scn7aB1AYL1 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Scn7aB1AYL1 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Scn7aB1AYL1 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Scn7aB1AYL1 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn7aB1AYL1 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Scn7aB1AYL1 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
Scn7aB1AYL1 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Scn7aB1AYL1 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn7aB1AYL1 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Scn7aB1AYL1 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Scn7aB1AYL1 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn7aB1AYL1 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Scn7aB1AYL1 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn7aB1AYL1 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn7aB1AYL1 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC19.88■□□□□ 0.77
Scn7aB1AYL1 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC19.88■□□□□ 0.77
Scn7aB1AYL1 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Scn7aB1AYL1 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn7aB1AYL1 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Scn7aB1AYL1 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn7aB1AYL1 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn7aB1AYL1 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn7aB1AYL1 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Scn7aB1AYL1 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn7aB1AYL1 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn7aB1AYL1 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
Scn7aB1AYL1 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn7aB1AYL1 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn7aB1AYL1 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC19.87■□□□□ 0.77
Scn7aB1AYL1 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn7aB1AYL1 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn7aB1AYL1 Ighv8-7-201ENSMUST00000194349 297 ntBASIC19.87■□□□□ 0.77
Scn7aB1AYL1 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn7aB1AYL1 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms