Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.68□□□□□ -0.54
Col6a5A6H584 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC11.68□□□□□ -0.54
Col6a5A6H584 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a5A6H584 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a5A6H584 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a5A6H584 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Col6a5A6H584 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a5A6H584 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a5A6H584 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a5A6H584 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Col6a5A6H584 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a5A6H584 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a5A6H584 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Col6a5A6H584 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC11.68□□□□□ -0.54
Col6a5A6H584 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Col6a5A6H584 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a5A6H584 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.68□□□□□ -0.54
Col6a5A6H584 Gm9002-201ENSMUST00000178437 499 ntBASIC11.68□□□□□ -0.54
Col6a5A6H584 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC11.68□□□□□ -0.54
Col6a5A6H584 Gm18624-201ENSMUST00000220966 658 ntBASIC11.68□□□□□ -0.54
Col6a5A6H584 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a5A6H584 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a5A6H584 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a5A6H584 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a5A6H584 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a5A6H584 AC130669.1-201ENSMUST00000228537 1672 ntBASIC11.67□□□□□ -0.54
Col6a5A6H584 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC11.67□□□□□ -0.54
Col6a5A6H584 Gm43179-201ENSMUST00000198797 275 ntBASIC11.67□□□□□ -0.54
Col6a5A6H584 Gm45195-201ENSMUST00000205597 1008 ntBASIC11.67□□□□□ -0.54
Col6a5A6H584 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a5A6H584 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Col6a5A6H584 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a5A6H584 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a5A6H584 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a5A6H584 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a5A6H584 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a5A6H584 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a5A6H584 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Col6a5A6H584 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC11.67□□□□□ -0.54
Col6a5A6H584 Gm17420-201ENSMUST00000164753 153 ntBASIC11.67□□□□□ -0.54
Col6a5A6H584 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a5A6H584 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC11.67□□□□□ -0.54
Col6a5A6H584 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC11.67□□□□□ -0.54
Col6a5A6H584 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a5A6H584 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a5A6H584 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a5A6H584 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a5A6H584 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a5A6H584 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a5A6H584 AC124392.1-201ENSMUST00000225172 5324 ntBASIC11.66□□□□□ -0.54
Col6a5A6H584 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a5A6H584 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a5A6H584 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a5A6H584 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a5A6H584 Gm4984-201ENSMUST00000115987 360 ntBASIC11.66□□□□□ -0.54
Col6a5A6H584 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC11.66□□□□□ -0.54
Col6a5A6H584 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a5A6H584 Snora78-201ENSMUST00000158630 128 ntBASIC11.66□□□□□ -0.54
Col6a5A6H584 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC11.66□□□□□ -0.54
Col6a5A6H584 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a5A6H584 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Col6a5A6H584 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a5A6H584 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a5A6H584 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a5A6H584 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a5A6H584 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a5A6H584 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Col6a5A6H584 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a5A6H584 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Col6a5A6H584 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a5A6H584 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a5A6H584 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a5A6H584 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a5A6H584 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC11.66□□□□□ -0.54
Col6a5A6H584 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC11.66□□□□□ -0.54
Col6a5A6H584 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Col6a5A6H584 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a5A6H584 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a5A6H584 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC11.66□□□□□ -0.54
Col6a5A6H584 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col6a5A6H584 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col6a5A6H584 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col6a5A6H584 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col6a5A6H584 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Col6a5A6H584 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col6a5A6H584 Gm15806-201ENSMUST00000120696 955 ntBASIC11.65□□□□□ -0.54
Col6a5A6H584 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col6a5A6H584 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col6a5A6H584 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col6a5A6H584 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC11.65□□□□□ -0.54
Col6a5A6H584 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
Col6a5A6H584 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col6a5A6H584 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC11.65□□□□□ -0.54
Col6a5A6H584 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col6a5A6H584 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col6a5A6H584 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col6a5A6H584 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col6a5A6H584 Zcchc6-207ENSMUST00000225576 2499 ntBASIC11.65□□□□□ -0.54
Col6a5A6H584 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col6a5A6H584 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms