Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chd6A3KFM7 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Chd6A3KFM7 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC12.58□□□□□ -0.4
Chd6A3KFM7 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Chd6A3KFM7 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chd6A3KFM7 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC12.58□□□□□ -0.4
Chd6A3KFM7 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC12.58□□□□□ -0.4
Chd6A3KFM7 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.58□□□□□ -0.4
Chd6A3KFM7 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Chd6A3KFM7 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.58□□□□□ -0.4
Chd6A3KFM7 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chd6A3KFM7 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chd6A3KFM7 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chd6A3KFM7 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd6A3KFM7 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd6A3KFM7 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chd6A3KFM7 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Chd6A3KFM7 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd6A3KFM7 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC12.57□□□□□ -0.4
Chd6A3KFM7 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd6A3KFM7 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd6A3KFM7 Gm15808-201ENSMUST00000119046 604 ntBASIC12.57□□□□□ -0.4
Chd6A3KFM7 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.57□□□□□ -0.4
Chd6A3KFM7 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chd6A3KFM7 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.57□□□□□ -0.4
Chd6A3KFM7 Gm2272-201ENSMUST00000194903 582 ntBASIC12.57□□□□□ -0.4
Chd6A3KFM7 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.57□□□□□ -0.4
Chd6A3KFM7 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.57□□□□□ -0.4
Chd6A3KFM7 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd6A3KFM7 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd6A3KFM7 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd6A3KFM7 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd6A3KFM7 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd6A3KFM7 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chd6A3KFM7 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd6A3KFM7 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd6A3KFM7 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd6A3KFM7 Gm11620-201ENSMUST00000118770 1845 ntBASIC12.57□□□□□ -0.4
Chd6A3KFM7 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd6A3KFM7 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chd6A3KFM7 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd6A3KFM7 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chd6A3KFM7 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.57□□□□□ -0.4
Chd6A3KFM7 AU022133-201ENSMUST00000200601 873 ntBASIC12.57□□□□□ -0.4
Chd6A3KFM7 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.57□□□□□ -0.4
Chd6A3KFM7 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd6A3KFM7 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.57□□□□□ -0.4
Chd6A3KFM7 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd6A3KFM7 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chd6A3KFM7 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Chd6A3KFM7 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd6A3KFM7 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Chd6A3KFM7 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.57□□□□□ -0.4
Chd6A3KFM7 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd6A3KFM7 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd6A3KFM7 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd6A3KFM7 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chd6A3KFM7 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chd6A3KFM7 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.56□□□□□ -0.4
Chd6A3KFM7 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Chd6A3KFM7 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chd6A3KFM7 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Chd6A3KFM7 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chd6A3KFM7 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC12.56□□□□□ -0.4
Chd6A3KFM7 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC12.56□□□□□ -0.4
Chd6A3KFM7 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chd6A3KFM7 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.56□□□□□ -0.4
Chd6A3KFM7 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chd6A3KFM7 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Chd6A3KFM7 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chd6A3KFM7 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chd6A3KFM7 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Chd6A3KFM7 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.56□□□□□ -0.4
Chd6A3KFM7 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Chd6A3KFM7 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chd6A3KFM7 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.56□□□□□ -0.4
Chd6A3KFM7 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chd6A3KFM7 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chd6A3KFM7 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chd6A3KFM7 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chd6A3KFM7 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Chd6A3KFM7 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chd6A3KFM7 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chd6A3KFM7 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Chd6A3KFM7 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd6A3KFM7 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC12.55□□□□□ -0.4
Chd6A3KFM7 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd6A3KFM7 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Chd6A3KFM7 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.55□□□□□ -0.4
Chd6A3KFM7 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.55□□□□□ -0.4
Chd6A3KFM7 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC12.55□□□□□ -0.4
Chd6A3KFM7 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd6A3KFM7 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd6A3KFM7 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Chd6A3KFM7 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Chd6A3KFM7 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Chd6A3KFM7 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd6A3KFM7 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Chd6A3KFM7 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd6A3KFM7 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms