Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a4A2AX52 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a4A2AX52 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a4A2AX52 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a4A2AX52 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a4A2AX52 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a4A2AX52 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a4A2AX52 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a4A2AX52 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a4A2AX52 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a4A2AX52 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a4A2AX52 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Col6a4A2AX52 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a4A2AX52 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a4A2AX52 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a4A2AX52 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a4A2AX52 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a4A2AX52 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a4A2AX52 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Col6a4A2AX52 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.13□□□□□ -0.31
Col6a4A2AX52 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a4A2AX52 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Col6a4A2AX52 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Col6a4A2AX52 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a4A2AX52 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a4A2AX52 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a4A2AX52 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.13□□□□□ -0.31
Col6a4A2AX52 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.13□□□□□ -0.31
Col6a4A2AX52 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a4A2AX52 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a4A2AX52 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.13□□□□□ -0.31
Col6a4A2AX52 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a4A2AX52 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a4A2AX52 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a4A2AX52 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Col6a4A2AX52 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.13□□□□□ -0.31
Col6a4A2AX52 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.13□□□□□ -0.31
Col6a4A2AX52 Gm27622-201ENSMUST00000183779 60 ntBASIC13.13□□□□□ -0.31
Col6a4A2AX52 Gm9682-201ENSMUST00000197505 556 ntBASIC13.13□□□□□ -0.31
Col6a4A2AX52 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Col6a4A2AX52 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a4A2AX52 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a4A2AX52 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a4A2AX52 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a4A2AX52 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a4A2AX52 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a4A2AX52 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a4A2AX52 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Col6a4A2AX52 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a4A2AX52 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a4A2AX52 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a4A2AX52 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Col6a4A2AX52 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a4A2AX52 Gm22175-201ENSMUST00000175007 78 ntBASIC13.12□□□□□ -0.31
Col6a4A2AX52 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a4A2AX52 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.12□□□□□ -0.31
Col6a4A2AX52 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a4A2AX52 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a4A2AX52 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Col6a4A2AX52 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a4A2AX52 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a4A2AX52 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC13.12□□□□□ -0.31
Col6a4A2AX52 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a4A2AX52 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a4A2AX52 Gm45774-201ENSMUST00000211992 2665 ntBASIC13.12□□□□□ -0.31
Col6a4A2AX52 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a4A2AX52 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC13.12□□□□□ -0.31
Col6a4A2AX52 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a4A2AX52 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a4A2AX52 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC13.12□□□□□ -0.31
Col6a4A2AX52 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Col6a4A2AX52 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a4A2AX52 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Col6a4A2AX52 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a4A2AX52 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a4A2AX52 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a4A2AX52 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a4A2AX52 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a4A2AX52 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.12□□□□□ -0.31
Col6a4A2AX52 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Col6a4A2AX52 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a4A2AX52 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a4A2AX52 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a4A2AX52 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a4A2AX52 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a4A2AX52 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a4A2AX52 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a4A2AX52 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a4A2AX52 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a4A2AX52 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a4A2AX52 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.11□□□□□ -0.31
Col6a4A2AX52 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a4A2AX52 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a4A2AX52 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a4A2AX52 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Col6a4A2AX52 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a4A2AX52 Sybu-209ENSMUST00000228639 4113 ntBASIC13.11□□□□□ -0.31
Col6a4A2AX52 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a4A2AX52 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.11□□□□□ -0.31
Col6a4A2AX52 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms