Protein–RNA interactions for Protein: A1L3C1

Fam71e1, Protein FAM71E1, mousemouse

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam71e1A1L3C1 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Fam71e1A1L3C1 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.51■□□□□ 0.87
Fam71e1A1L3C1 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Fam71e1A1L3C1 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Fam71e1A1L3C1 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Fam71e1A1L3C1 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.51■□□□□ 0.87
Fam71e1A1L3C1 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Fam71e1A1L3C1 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Fam71e1A1L3C1 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Fam71e1A1L3C1 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Fam71e1A1L3C1 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Fam71e1A1L3C1 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Fam71e1A1L3C1 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Fam71e1A1L3C1 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Fam71e1A1L3C1 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Fam71e1A1L3C1 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fam71e1A1L3C1 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fam71e1A1L3C1 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Fam71e1A1L3C1 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Fam71e1A1L3C1 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
Fam71e1A1L3C1 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fam71e1A1L3C1 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fam71e1A1L3C1 Gm43183-201ENSMUST00000200632 547 ntBASIC20.5■□□□□ 0.87
Fam71e1A1L3C1 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fam71e1A1L3C1 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fam71e1A1L3C1 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fam71e1A1L3C1 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fam71e1A1L3C1 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fam71e1A1L3C1 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fam71e1A1L3C1 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fam71e1A1L3C1 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fam71e1A1L3C1 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Fam71e1A1L3C1 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fam71e1A1L3C1 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fam71e1A1L3C1 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Fam71e1A1L3C1 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Fam71e1A1L3C1 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Fam71e1A1L3C1 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Fam71e1A1L3C1 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Fam71e1A1L3C1 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Fam71e1A1L3C1 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Fam71e1A1L3C1 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Fam71e1A1L3C1 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Fam71e1A1L3C1 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Fam71e1A1L3C1 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
Fam71e1A1L3C1 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Fam71e1A1L3C1 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
Fam71e1A1L3C1 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Fam71e1A1L3C1 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Fam71e1A1L3C1 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Fam71e1A1L3C1 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Fam71e1A1L3C1 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Fam71e1A1L3C1 Gm42535-201ENSMUST00000197312 1399 ntBASIC20.48■□□□□ 0.87
Fam71e1A1L3C1 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.48■□□□□ 0.87
Fam71e1A1L3C1 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Fam71e1A1L3C1 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Fam71e1A1L3C1 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
Fam71e1A1L3C1 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Fam71e1A1L3C1 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Fam71e1A1L3C1 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Fam71e1A1L3C1 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Fam71e1A1L3C1 AV099323-201ENSMUST00000124336 921 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Fam71e1A1L3C1 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20.48■□□□□ 0.87
Fam71e1A1L3C1 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC20.48■□□□□ 0.87
Fam71e1A1L3C1 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC20.48■□□□□ 0.87
Fam71e1A1L3C1 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Fam71e1A1L3C1 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC20.48■□□□□ 0.87
Fam71e1A1L3C1 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Fam71e1A1L3C1 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Fam71e1A1L3C1 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Fam71e1A1L3C1 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Fam71e1A1L3C1 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Fam71e1A1L3C1 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Fam71e1A1L3C1 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Fam71e1A1L3C1 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Fam71e1A1L3C1 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Fam71e1A1L3C1 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Fam71e1A1L3C1 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Fam71e1A1L3C1 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Fam71e1A1L3C1 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Fam71e1A1L3C1 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Fam71e1A1L3C1 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Fam71e1A1L3C1 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Fam71e1A1L3C1 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Fam71e1A1L3C1 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Fam71e1A1L3C1 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Fam71e1A1L3C1 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Fam71e1A1L3C1 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Fam71e1A1L3C1 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Fam71e1A1L3C1 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Fam71e1A1L3C1 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Fam71e1A1L3C1 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Fam71e1A1L3C1 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Fam71e1A1L3C1 Gm13034-201ENSMUST00000121342 3177 ntBASIC20.47■□□□□ 0.87
Fam71e1A1L3C1 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Fam71e1A1L3C1 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Fam71e1A1L3C1 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Fam71e1A1L3C1 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Fam71e1A1L3C1 Gm21814-202ENSMUST00000203277 873 ntBASIC20.47■□□□□ 0.87
Fam71e1A1L3C1 AC165260.5-201ENSMUST00000224640 1247 ntBASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms