Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12-1A0N8R1 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12-1A0N8R1 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12-1A0N8R1 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12-1A0N8R1 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12-1A0N8R1 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12-1A0N8R1 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12-1A0N8R1 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav12-1A0N8R1 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12-1A0N8R1 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12-1A0N8R1 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12-1A0N8R1 Gm10013-201ENSMUST00000106074 672 ntBASIC13.03□□□□□ -0.32
Trav12-1A0N8R1 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav12-1A0N8R1 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav12-1A0N8R1 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12-1A0N8R1 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC13.03□□□□□ -0.32
Trav12-1A0N8R1 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12-1A0N8R1 Gm6623-201ENSMUST00000173570 544 ntBASIC13.03□□□□□ -0.32
Trav12-1A0N8R1 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Trav12-1A0N8R1 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12-1A0N8R1 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav12-1A0N8R1 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12-1A0N8R1 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12-1A0N8R1 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trav12-1A0N8R1 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12-1A0N8R1 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav12-1A0N8R1 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12-1A0N8R1 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12-1A0N8R1 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12-1A0N8R1 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12-1A0N8R1 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12-1A0N8R1 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12-1A0N8R1 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav12-1A0N8R1 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav12-1A0N8R1 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav12-1A0N8R1 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav12-1A0N8R1 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav12-1A0N8R1 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.02□□□□□ -0.32
Trav12-1A0N8R1 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav12-1A0N8R1 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Trav12-1A0N8R1 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav12-1A0N8R1 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav12-1A0N8R1 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav12-1A0N8R1 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav12-1A0N8R1 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav12-1A0N8R1 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav12-1A0N8R1 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.02□□□□□ -0.33
Trav12-1A0N8R1 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav12-1A0N8R1 Krtap5-1-202ENSMUST00000188274 742 ntBASIC13.02□□□□□ -0.33
Trav12-1A0N8R1 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav12-1A0N8R1 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav12-1A0N8R1 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trav12-1A0N8R1 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav12-1A0N8R1 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav12-1A0N8R1 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav12-1A0N8R1 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav12-1A0N8R1 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav12-1A0N8R1 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav12-1A0N8R1 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trav12-1A0N8R1 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav12-1A0N8R1 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav12-1A0N8R1 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav12-1A0N8R1 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.02□□□□□ -0.33
Trav12-1A0N8R1 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav12-1A0N8R1 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav12-1A0N8R1 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12-1A0N8R1 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12-1A0N8R1 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Trav12-1A0N8R1 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12-1A0N8R1 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12-1A0N8R1 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav12-1A0N8R1 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12-1A0N8R1 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12-1A0N8R1 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav12-1A0N8R1 Gm25406-201ENSMUST00000157599 105 ntBASIC13.01□□□□□ -0.33
Trav12-1A0N8R1 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav12-1A0N8R1 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trav12-1A0N8R1 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav12-1A0N8R1 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12-1A0N8R1 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12-1A0N8R1 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12-1A0N8R1 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12-1A0N8R1 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12-1A0N8R1 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav12-1A0N8R1 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12-1A0N8R1 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Trav12-1A0N8R1 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12-1A0N8R1 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12-1A0N8R1 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12-1A0N8R1 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav12-1A0N8R1 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Trav12-1A0N8R1 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12-1A0N8R1 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12-1A0N8R1 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12-1A0N8R1 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav12-1A0N8R1 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Trav12-1A0N8R1 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav12-1A0N8R1 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav12-1A0N8R1 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13□□□□□ -0.33
Trav12-1A0N8R1 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms