Protein–RNA interactions for Protein: A0A0N4SVP8

Gm5580, Predicted pseudogene 5580, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5580A0A0N4SVP8 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm5580A0A0N4SVP8 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm5580A0A0N4SVP8 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Gm5580A0A0N4SVP8 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm5580A0A0N4SVP8 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
Gm5580A0A0N4SVP8 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm5580A0A0N4SVP8 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Gm5580A0A0N4SVP8 Gm9013-201ENSMUST00000132939 882 ntBASIC17.02■□□□□ 0.32
Gm5580A0A0N4SVP8 Gm6345-202ENSMUST00000180900 204 ntBASIC17.02■□□□□ 0.32
Gm5580A0A0N4SVP8 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.02■□□□□ 0.32
Gm5580A0A0N4SVP8 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Gm5580A0A0N4SVP8 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm5580A0A0N4SVP8 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Gm5580A0A0N4SVP8 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm5580A0A0N4SVP8 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm5580A0A0N4SVP8 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Gm5580A0A0N4SVP8 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Gm5580A0A0N4SVP8 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.02■□□□□ 0.31
Gm5580A0A0N4SVP8 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Gm5580A0A0N4SVP8 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.02■□□□□ 0.31
Gm5580A0A0N4SVP8 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.02■□□□□ 0.31
Gm5580A0A0N4SVP8 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Gm5580A0A0N4SVP8 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Gm5580A0A0N4SVP8 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm5580A0A0N4SVP8 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm5580A0A0N4SVP8 Gm6659-201ENSMUST00000174752 547 ntBASIC17.01■□□□□ 0.31
Gm5580A0A0N4SVP8 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.01■□□□□ 0.31
Gm5580A0A0N4SVP8 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm5580A0A0N4SVP8 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm5580A0A0N4SVP8 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Gm5580A0A0N4SVP8 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm5580A0A0N4SVP8 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Gm5580A0A0N4SVP8 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm5580A0A0N4SVP8 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm5580A0A0N4SVP8 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm5580A0A0N4SVP8 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm5580A0A0N4SVP8 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Gm5580A0A0N4SVP8 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.01■□□□□ 0.31
Gm5580A0A0N4SVP8 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm5580A0A0N4SVP8 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17■□□□□ 0.31
Gm5580A0A0N4SVP8 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Gm5580A0A0N4SVP8 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17■□□□□ 0.31
Gm5580A0A0N4SVP8 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm5580A0A0N4SVP8 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm5580A0A0N4SVP8 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm5580A0A0N4SVP8 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Gm5580A0A0N4SVP8 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17■□□□□ 0.31
Gm5580A0A0N4SVP8 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17■□□□□ 0.31
Gm5580A0A0N4SVP8 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
Gm5580A0A0N4SVP8 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17■□□□□ 0.31
Gm5580A0A0N4SVP8 Gm8784-201ENSMUST00000222096 1435 ntBASIC17■□□□□ 0.31
Gm5580A0A0N4SVP8 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17■□□□□ 0.31
Gm5580A0A0N4SVP8 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm5580A0A0N4SVP8 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm5580A0A0N4SVP8 Gm7367-201ENSMUST00000057611 492 ntBASIC17■□□□□ 0.31
Gm5580A0A0N4SVP8 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Gm5580A0A0N4SVP8 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm5580A0A0N4SVP8 Gm11839-201ENSMUST00000120647 1953 ntBASIC17■□□□□ 0.31
Gm5580A0A0N4SVP8 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm5580A0A0N4SVP8 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Gm5580A0A0N4SVP8 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm5580A0A0N4SVP8 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Gm5580A0A0N4SVP8 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm5580A0A0N4SVP8 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm5580A0A0N4SVP8 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm5580A0A0N4SVP8 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Gm5580A0A0N4SVP8 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Gm5580A0A0N4SVP8 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Gm5580A0A0N4SVP8 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
Gm5580A0A0N4SVP8 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Gm5580A0A0N4SVP8 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm5580A0A0N4SVP8 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm5580A0A0N4SVP8 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Gm5580A0A0N4SVP8 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm5580A0A0N4SVP8 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm5580A0A0N4SVP8 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Gm5580A0A0N4SVP8 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Gm5580A0A0N4SVP8 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm5580A0A0N4SVP8 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm5580A0A0N4SVP8 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Gm5580A0A0N4SVP8 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm5580A0A0N4SVP8 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm5580A0A0N4SVP8 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm5580A0A0N4SVP8 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Gm5580A0A0N4SVP8 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm5580A0A0N4SVP8 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Gm5580A0A0N4SVP8 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Gm5580A0A0N4SVP8 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Gm5580A0A0N4SVP8 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Gm5580A0A0N4SVP8 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm5580A0A0N4SVP8 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.98■□□□□ 0.31
Gm5580A0A0N4SVP8 Gm5587-201ENSMUST00000206270 674 ntBASIC16.98■□□□□ 0.31
Gm5580A0A0N4SVP8 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.98■□□□□ 0.31
Gm5580A0A0N4SVP8 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.98■□□□□ 0.31
Gm5580A0A0N4SVP8 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm5580A0A0N4SVP8 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm5580A0A0N4SVP8 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm5580A0A0N4SVP8 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm5580A0A0N4SVP8 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
Gm5580A0A0N4SVP8 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms