Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Trav13n-4A0A0G2JG01 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-4A0A0G2JG01 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC12.68□□□□□ -0.38
Trav13n-4A0A0G2JG01 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-4A0A0G2JG01 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Trav13n-4A0A0G2JG01 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-4A0A0G2JG01 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-4A0A0G2JG01 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-4A0A0G2JG01 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-4A0A0G2JG01 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-4A0A0G2JG01 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-4A0A0G2JG01 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-4A0A0G2JG01 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-4A0A0G2JG01 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-4A0A0G2JG01 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-4A0A0G2JG01 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-4A0A0G2JG01 Gm42473-201ENSMUST00000201056 2291 ntBASIC12.68□□□□□ -0.38
Trav13n-4A0A0G2JG01 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-4A0A0G2JG01 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav13n-4A0A0G2JG01 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav13n-4A0A0G2JG01 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13n-4A0A0G2JG01 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav13n-4A0A0G2JG01 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13n-4A0A0G2JG01 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13n-4A0A0G2JG01 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13n-4A0A0G2JG01 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13n-4A0A0G2JG01 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13n-4A0A0G2JG01 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav13n-4A0A0G2JG01 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13n-4A0A0G2JG01 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Trav13n-4A0A0G2JG01 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13n-4A0A0G2JG01 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav13n-4A0A0G2JG01 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.67□□□□□ -0.38
Trav13n-4A0A0G2JG01 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.67□□□□□ -0.38
Trav13n-4A0A0G2JG01 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.67□□□□□ -0.38
Trav13n-4A0A0G2JG01 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13n-4A0A0G2JG01 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13n-4A0A0G2JG01 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13n-4A0A0G2JG01 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13n-4A0A0G2JG01 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13n-4A0A0G2JG01 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trav13n-4A0A0G2JG01 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13n-4A0A0G2JG01 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13n-4A0A0G2JG01 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav13n-4A0A0G2JG01 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13n-4A0A0G2JG01 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav13n-4A0A0G2JG01 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav13n-4A0A0G2JG01 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13n-4A0A0G2JG01 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13n-4A0A0G2JG01 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13n-4A0A0G2JG01 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13n-4A0A0G2JG01 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13n-4A0A0G2JG01 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trav13n-4A0A0G2JG01 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13n-4A0A0G2JG01 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13n-4A0A0G2JG01 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13n-4A0A0G2JG01 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13n-4A0A0G2JG01 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13n-4A0A0G2JG01 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13n-4A0A0G2JG01 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13n-4A0A0G2JG01 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Trav13n-4A0A0G2JG01 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav13n-4A0A0G2JG01 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13n-4A0A0G2JG01 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC12.66□□□□□ -0.38
Trav13n-4A0A0G2JG01 Gm1818-201ENSMUST00000169406 1184 ntBASIC12.66□□□□□ -0.38
Trav13n-4A0A0G2JG01 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC12.66□□□□□ -0.38
Trav13n-4A0A0G2JG01 Gm44450-201ENSMUST00000199528 114 ntBASIC12.66□□□□□ -0.38
Trav13n-4A0A0G2JG01 Gm18421-201ENSMUST00000204122 625 ntBASIC12.66□□□□□ -0.38
Trav13n-4A0A0G2JG01 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13n-4A0A0G2JG01 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13n-4A0A0G2JG01 Cmtm5-203ENSMUST00000227441 610 ntBASIC12.66□□□□□ -0.38
Trav13n-4A0A0G2JG01 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13n-4A0A0G2JG01 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13n-4A0A0G2JG01 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav13n-4A0A0G2JG01 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav13n-4A0A0G2JG01 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13n-4A0A0G2JG01 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13n-4A0A0G2JG01 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13n-4A0A0G2JG01 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav13n-4A0A0G2JG01 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13n-4A0A0G2JG01 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13n-4A0A0G2JG01 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13n-4A0A0G2JG01 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13n-4A0A0G2JG01 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13n-4A0A0G2JG01 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13n-4A0A0G2JG01 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13n-4A0A0G2JG01 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13n-4A0A0G2JG01 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trav13n-4A0A0G2JG01 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13n-4A0A0G2JG01 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.65□□□□□ -0.38
Trav13n-4A0A0G2JG01 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13n-4A0A0G2JG01 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13n-4A0A0G2JG01 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trav13n-4A0A0G2JG01 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13n-4A0A0G2JG01 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13n-4A0A0G2JG01 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13n-4A0A0G2JG01 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13n-4A0A0G2JG01 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.65□□□□□ -0.38
Trav13n-4A0A0G2JG01 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13n-4A0A0G2JG01 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms