Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC10.77□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC10.77□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC10.77□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Gm27528-202ENSMUST00000222916 2012 ntBASIC10.77□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC10.76□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC10.76□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC10.76□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC10.76□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Gm27011-201ENSMUST00000182352 972 ntBASIC10.76□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Mir1668-201ENSMUST00000184114 107 ntBASIC10.76□□□□□ -0.69
Trav13d-4A0A0G2JFX3 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC10.76□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Gm9484-201ENSMUST00000195892 1159 ntBASIC10.76□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC10.76□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC10.76□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC10.75□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Trav13d-4A0A0G2JFX3 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13d-4A0A0G2JFX3 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms