Protein–RNA interactions for Protein: A0A0G2JFC6

Igkv4-53, Immunoglobulin kappa variable 4-53 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-53A0A0G2JFC6 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Gm44729-201ENSMUST00000206759 2052 ntBASIC11.05□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Igkv4-53A0A0G2JFC6 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC11.05□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC11.05□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC11.04□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Gm42473-201ENSMUST00000201056 2291 ntBASIC11.04□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Gm15794-201ENSMUST00000120182 631 ntBASIC11.04□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC11.04□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC11.04□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC11.03□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC11.03□□□□□ -0.64
Igkv4-53A0A0G2JFC6 AC114585.2-202ENSMUST00000228094 426 ntBASIC11.03□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Igkv4-53A0A0G2JFC6 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC11.02□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.02□□□□□ -0.65
Igkv4-53A0A0G2JFC6 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Igkv4-53A0A0G2JFC6 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Igkv4-53A0A0G2JFC6 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC11.02□□□□□ -0.65
Igkv4-53A0A0G2JFC6 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Igkv4-53A0A0G2JFC6 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Igkv4-53A0A0G2JFC6 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC11.02□□□□□ -0.65
Igkv4-53A0A0G2JFC6 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC11.02□□□□□ -0.65
Igkv4-53A0A0G2JFC6 Ighv6-1-201ENSMUST00000193612 343 ntBASIC11.02□□□□□ -0.65
Igkv4-53A0A0G2JFC6 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Igkv4-53A0A0G2JFC6 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Igkv4-53A0A0G2JFC6 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC11.02□□□□□ -0.65
Igkv4-53A0A0G2JFC6 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Igkv4-53A0A0G2JFC6 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Igkv4-53A0A0G2JFC6 Gm37812-201ENSMUST00000195216 2475 ntBASIC11.02□□□□□ -0.65
Igkv4-53A0A0G2JFC6 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
Igkv4-53A0A0G2JFC6 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Igkv4-53A0A0G2JFC6 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Igkv4-53A0A0G2JFC6 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Igkv4-53A0A0G2JFC6 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Igkv4-53A0A0G2JFC6 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms