Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Timm23-208ENSMUST00000226683 750 ntBASIC11.85□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Tfap2a-203ENSMUST00000223869 2037 ntBASIC11.85□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC11.84□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3n-3A0A0G2JEM0 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav3n-3A0A0G2JEM0 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Gm45504-201ENSMUST00000211407 2107 ntBASIC11.84□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC11.84□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3n-3A0A0G2JEM0 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3n-3A0A0G2JEM0 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Gm12527-201ENSMUST00000117967 564 ntBASIC11.83□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Gm12085-201ENSMUST00000119263 940 ntBASIC11.83□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC11.83□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC11.83□□□□□ -0.52
Trav3n-3A0A0G2JEM0 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC11.83□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC11.83□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.82□□□□□ -0.52
Trav3n-3A0A0G2JEM0 BC037039-201ENSMUST00000192003 2205 ntBASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms