Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv3A0A0A6YYE2 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv3A0A0A6YYE2 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.06□□□□□ -0.48
Trbv3A0A0A6YYE2 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv3A0A0A6YYE2 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv3A0A0A6YYE2 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv3A0A0A6YYE2 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv3A0A0A6YYE2 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv3A0A0A6YYE2 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv3A0A0A6YYE2 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trbv3A0A0A6YYE2 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv3A0A0A6YYE2 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trbv3A0A0A6YYE2 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.05□□□□□ -0.48
Trbv3A0A0A6YYE2 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv3A0A0A6YYE2 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv3A0A0A6YYE2 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv3A0A0A6YYE2 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv3A0A0A6YYE2 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv3A0A0A6YYE2 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv3A0A0A6YYE2 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv3A0A0A6YYE2 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv3A0A0A6YYE2 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv3A0A0A6YYE2 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv3A0A0A6YYE2 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv3A0A0A6YYE2 Gm18284-201ENSMUST00000172604 624 ntBASIC12.05□□□□□ -0.48
Trbv3A0A0A6YYE2 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv3A0A0A6YYE2 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC12.05□□□□□ -0.48
Trbv3A0A0A6YYE2 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Trbv3A0A0A6YYE2 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv3A0A0A6YYE2 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trbv3A0A0A6YYE2 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv3A0A0A6YYE2 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv3A0A0A6YYE2 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv3A0A0A6YYE2 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv3A0A0A6YYE2 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv3A0A0A6YYE2 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv3A0A0A6YYE2 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv3A0A0A6YYE2 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv3A0A0A6YYE2 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv3A0A0A6YYE2 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv3A0A0A6YYE2 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv3A0A0A6YYE2 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv3A0A0A6YYE2 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv3A0A0A6YYE2 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv3A0A0A6YYE2 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv3A0A0A6YYE2 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv3A0A0A6YYE2 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv3A0A0A6YYE2 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv3A0A0A6YYE2 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trbv3A0A0A6YYE2 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv3A0A0A6YYE2 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC12.04□□□□□ -0.48
Trbv3A0A0A6YYE2 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv3A0A0A6YYE2 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv3A0A0A6YYE2 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC12.04□□□□□ -0.48
Trbv3A0A0A6YYE2 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC12.04□□□□□ -0.48
Trbv3A0A0A6YYE2 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.04□□□□□ -0.48
Trbv3A0A0A6YYE2 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv3A0A0A6YYE2 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv3A0A0A6YYE2 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv3A0A0A6YYE2 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv3A0A0A6YYE2 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv3A0A0A6YYE2 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv3A0A0A6YYE2 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv3A0A0A6YYE2 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv3A0A0A6YYE2 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv3A0A0A6YYE2 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv3A0A0A6YYE2 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv3A0A0A6YYE2 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Trbv3A0A0A6YYE2 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv3A0A0A6YYE2 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv3A0A0A6YYE2 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.04□□□□□ -0.48
Trbv3A0A0A6YYE2 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv3A0A0A6YYE2 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv3A0A0A6YYE2 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Trbv3A0A0A6YYE2 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv3A0A0A6YYE2 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trbv3A0A0A6YYE2 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv3A0A0A6YYE2 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv3A0A0A6YYE2 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv3A0A0A6YYE2 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv3A0A0A6YYE2 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv3A0A0A6YYE2 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv3A0A0A6YYE2 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trbv3A0A0A6YYE2 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv3A0A0A6YYE2 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trbv3A0A0A6YYE2 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv3A0A0A6YYE2 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv3A0A0A6YYE2 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv3A0A0A6YYE2 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv3A0A0A6YYE2 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv3A0A0A6YYE2 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv3A0A0A6YYE2 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv3A0A0A6YYE2 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trbv3A0A0A6YYE2 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv3A0A0A6YYE2 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv3A0A0A6YYE2 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv3A0A0A6YYE2 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trbv3A0A0A6YYE2 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trbv3A0A0A6YYE2 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.03□□□□□ -0.48
Trbv3A0A0A6YYE2 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms