Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Gm44430-201ENSMUST00000203376 995 ntBASIC12.62□□□□□ -0.39
Trav6d-5A0A075B6B9 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6d-5A0A075B6B9 AC122351.1-201ENSMUST00000220467 126 ntBASIC12.62□□□□□ -0.39
Trav6d-5A0A075B6B9 Gm7367-201ENSMUST00000057611 492 ntBASIC12.62□□□□□ -0.39
Trav6d-5A0A075B6B9 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6d-5A0A075B6B9 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6d-5A0A075B6B9 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6d-5A0A075B6B9 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav6d-5A0A075B6B9 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trav6d-5A0A075B6B9 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6d-5A0A075B6B9 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trav6d-5A0A075B6B9 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6d-5A0A075B6B9 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6d-5A0A075B6B9 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav6d-5A0A075B6B9 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.61□□□□□ -0.39
Trav6d-5A0A075B6B9 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trav6d-5A0A075B6B9 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-5A0A075B6B9 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-5A0A075B6B9 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-5A0A075B6B9 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-5A0A075B6B9 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-5A0A075B6B9 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.61□□□□□ -0.39
Trav6d-5A0A075B6B9 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-5A0A075B6B9 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav6d-5A0A075B6B9 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-5A0A075B6B9 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav6d-5A0A075B6B9 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav6d-5A0A075B6B9 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav6d-5A0A075B6B9 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-5A0A075B6B9 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-5A0A075B6B9 AC164629.5-201ENSMUST00000220387 632 ntBASIC12.61□□□□□ -0.39
Trav6d-5A0A075B6B9 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav6d-5A0A075B6B9 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-5A0A075B6B9 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-5A0A075B6B9 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-5A0A075B6B9 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-5A0A075B6B9 Efs-202ENSMUST00000227037 2540 ntBASIC12.61□□□□□ -0.39
Trav6d-5A0A075B6B9 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-5A0A075B6B9 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-5A0A075B6B9 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-5A0A075B6B9 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-5A0A075B6B9 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-5A0A075B6B9 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-5A0A075B6B9 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-5A0A075B6B9 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-5A0A075B6B9 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-5A0A075B6B9 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-5A0A075B6B9 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav6d-5A0A075B6B9 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav6d-5A0A075B6B9 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-5A0A075B6B9 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav6d-5A0A075B6B9 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-5A0A075B6B9 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-5A0A075B6B9 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-5A0A075B6B9 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-5A0A075B6B9 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trav6d-5A0A075B6B9 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-5A0A075B6B9 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-5A0A075B6B9 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-5A0A075B6B9 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-5A0A075B6B9 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-5A0A075B6B9 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav6d-5A0A075B6B9 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-5A0A075B6B9 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-5A0A075B6B9 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-5A0A075B6B9 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav6d-5A0A075B6B9 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Trav6d-5A0A075B6B9 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-5A0A075B6B9 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC12.6□□□□□ -0.39
Trav6d-5A0A075B6B9 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-5A0A075B6B9 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav6d-5A0A075B6B9 Gm10052-201ENSMUST00000168019 960 ntBASIC12.6□□□□□ -0.39
Trav6d-5A0A075B6B9 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-5A0A075B6B9 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC12.6□□□□□ -0.39
Trav6d-5A0A075B6B9 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.6□□□□□ -0.39
Trav6d-5A0A075B6B9 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-5A0A075B6B9 Gm7729-201ENSMUST00000050143 801 ntBASIC12.6□□□□□ -0.39
Trav6d-5A0A075B6B9 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-5A0A075B6B9 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-5A0A075B6B9 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-5A0A075B6B9 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-5A0A075B6B9 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-5A0A075B6B9 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-5A0A075B6B9 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-5A0A075B6B9 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-5A0A075B6B9 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.6□□□□□ -0.39
Trav6d-5A0A075B6B9 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-5A0A075B6B9 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-5A0A075B6B9 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav6d-5A0A075B6B9 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-5A0A075B6B9 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-5A0A075B6B9 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-5A0A075B6B9 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-5A0A075B6B9 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC12.59□□□□□ -0.39
Trav6d-5A0A075B6B9 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-5A0A075B6B9 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-5A0A075B6B9 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-5A0A075B6B9 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-5A0A075B6B9 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-5A0A075B6B9 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms