Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-5A0A075B6B5 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-5A0A075B6B5 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-5A0A075B6B5 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-5A0A075B6B5 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-5A0A075B6B5 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav6-5A0A075B6B5 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-5A0A075B6B5 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-5A0A075B6B5 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC12.11□□□□□ -0.47
Trav6-5A0A075B6B5 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-5A0A075B6B5 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav6-5A0A075B6B5 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-5A0A075B6B5 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-5A0A075B6B5 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav6-5A0A075B6B5 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav6-5A0A075B6B5 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-5A0A075B6B5 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-5A0A075B6B5 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav6-5A0A075B6B5 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-5A0A075B6B5 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav6-5A0A075B6B5 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-5A0A075B6B5 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-5A0A075B6B5 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.1□□□□□ -0.47
Trav6-5A0A075B6B5 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-5A0A075B6B5 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-5A0A075B6B5 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav6-5A0A075B6B5 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-5A0A075B6B5 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.1□□□□□ -0.47
Trav6-5A0A075B6B5 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-5A0A075B6B5 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-5A0A075B6B5 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-5A0A075B6B5 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Trav6-5A0A075B6B5 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav6-5A0A075B6B5 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.1□□□□□ -0.47
Trav6-5A0A075B6B5 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-5A0A075B6B5 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-5A0A075B6B5 Gm11539-201ENSMUST00000119837 557 ntBASIC12.1□□□□□ -0.47
Trav6-5A0A075B6B5 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-5A0A075B6B5 Gm44878-201ENSMUST00000205812 1295 ntBASIC12.1□□□□□ -0.47
Trav6-5A0A075B6B5 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-5A0A075B6B5 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-5A0A075B6B5 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-5A0A075B6B5 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-5A0A075B6B5 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-5A0A075B6B5 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-5A0A075B6B5 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-5A0A075B6B5 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-5A0A075B6B5 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-5A0A075B6B5 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-5A0A075B6B5 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-5A0A075B6B5 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-5A0A075B6B5 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trav6-5A0A075B6B5 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-5A0A075B6B5 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Trav6-5A0A075B6B5 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-5A0A075B6B5 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav6-5A0A075B6B5 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-5A0A075B6B5 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-5A0A075B6B5 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-5A0A075B6B5 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-5A0A075B6B5 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Trav6-5A0A075B6B5 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-5A0A075B6B5 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-5A0A075B6B5 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-5A0A075B6B5 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-5A0A075B6B5 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-5A0A075B6B5 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-5A0A075B6B5 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-5A0A075B6B5 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav6-5A0A075B6B5 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-5A0A075B6B5 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-5A0A075B6B5 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-5A0A075B6B5 Gm15378-201ENSMUST00000121894 207 ntBASIC12.09□□□□□ -0.47
Trav6-5A0A075B6B5 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-5A0A075B6B5 Gm6257-201ENSMUST00000163864 910 ntBASIC12.09□□□□□ -0.47
Trav6-5A0A075B6B5 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-5A0A075B6B5 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Trav6-5A0A075B6B5 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-5A0A075B6B5 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-5A0A075B6B5 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-5A0A075B6B5 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-5A0A075B6B5 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-5A0A075B6B5 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-5A0A075B6B5 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-5A0A075B6B5 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav6-5A0A075B6B5 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-5A0A075B6B5 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-5A0A075B6B5 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-5A0A075B6B5 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.09□□□□□ -0.47
Trav6-5A0A075B6B5 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav6-5A0A075B6B5 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav6-5A0A075B6B5 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-5A0A075B6B5 Efs-202ENSMUST00000227037 2540 ntBASIC12.08□□□□□ -0.48
Trav6-5A0A075B6B5 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-5A0A075B6B5 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-5A0A075B6B5 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-5A0A075B6B5 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-5A0A075B6B5 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-5A0A075B6B5 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trav6-5A0A075B6B5 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms