Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav17A0A075B655 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav17A0A075B655 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav17A0A075B655 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav17A0A075B655 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav17A0A075B655 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav17A0A075B655 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav17A0A075B655 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav17A0A075B655 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav17A0A075B655 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav17A0A075B655 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav17A0A075B655 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav17A0A075B655 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav17A0A075B655 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav17A0A075B655 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav17A0A075B655 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav17A0A075B655 Mir1668-201ENSMUST00000184114 107 ntBASIC12.42□□□□□ -0.42
Trav17A0A075B655 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav17A0A075B655 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC12.42□□□□□ -0.42
Trav17A0A075B655 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav17A0A075B655 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav17A0A075B655 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav17A0A075B655 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trav17A0A075B655 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.42□□□□□ -0.42
Trav17A0A075B655 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav17A0A075B655 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav17A0A075B655 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav17A0A075B655 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.42□□□□□ -0.42
Trav17A0A075B655 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Trav17A0A075B655 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav17A0A075B655 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Trav17A0A075B655 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav17A0A075B655 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav17A0A075B655 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav17A0A075B655 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav17A0A075B655 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Trav17A0A075B655 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav17A0A075B655 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav17A0A075B655 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Trav17A0A075B655 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.41□□□□□ -0.42
Trav17A0A075B655 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav17A0A075B655 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.41□□□□□ -0.42
Trav17A0A075B655 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav17A0A075B655 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Trav17A0A075B655 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav17A0A075B655 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC12.41□□□□□ -0.42
Trav17A0A075B655 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC12.41□□□□□ -0.42
Trav17A0A075B655 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav17A0A075B655 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC12.41□□□□□ -0.42
Trav17A0A075B655 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav17A0A075B655 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav17A0A075B655 Gm10052-201ENSMUST00000168019 960 ntBASIC12.41□□□□□ -0.42
Trav17A0A075B655 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav17A0A075B655 Gm9889-202ENSMUST00000206983 1577 ntBASIC12.41□□□□□ -0.42
Trav17A0A075B655 CT025689.6-201ENSMUST00000224991 1104 ntBASIC12.41□□□□□ -0.42
Trav17A0A075B655 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav17A0A075B655 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav17A0A075B655 Gm7729-201ENSMUST00000050143 801 ntBASIC12.41□□□□□ -0.42
Trav17A0A075B655 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC12.41□□□□□ -0.42
Trav17A0A075B655 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav17A0A075B655 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav17A0A075B655 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav17A0A075B655 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav17A0A075B655 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav17A0A075B655 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.41□□□□□ -0.42
Trav17A0A075B655 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav17A0A075B655 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trav17A0A075B655 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav17A0A075B655 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav17A0A075B655 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav17A0A075B655 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav17A0A075B655 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav17A0A075B655 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav17A0A075B655 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav17A0A075B655 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav17A0A075B655 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav17A0A075B655 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav17A0A075B655 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Trav17A0A075B655 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav17A0A075B655 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav17A0A075B655 Gm6257-201ENSMUST00000163864 910 ntBASIC12.4□□□□□ -0.42
Trav17A0A075B655 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trav17A0A075B655 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC12.4□□□□□ -0.42
Trav17A0A075B655 Gm30025-201ENSMUST00000218555 728 ntBASIC12.4□□□□□ -0.42
Trav17A0A075B655 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC12.4□□□□□ -0.42
Trav17A0A075B655 Gm5417-201ENSMUST00000079706 384 ntBASIC12.4□□□□□ -0.42
Trav17A0A075B655 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav17A0A075B655 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trav17A0A075B655 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav17A0A075B655 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trav17A0A075B655 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav17A0A075B655 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav17A0A075B655 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav17A0A075B655 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav17A0A075B655 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav17A0A075B655 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav17A0A075B655 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav17A0A075B655 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav17A0A075B655 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav17A0A075B655 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms