Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16A0A075B653 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC12.1□□□□□ -0.47
Trav16A0A075B653 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16A0A075B653 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16A0A075B653 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16A0A075B653 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trav16A0A075B653 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16A0A075B653 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16A0A075B653 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16A0A075B653 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trav16A0A075B653 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16A0A075B653 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trav16A0A075B653 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16A0A075B653 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16A0A075B653 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16A0A075B653 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trav16A0A075B653 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16A0A075B653 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16A0A075B653 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16A0A075B653 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16A0A075B653 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16A0A075B653 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav16A0A075B653 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16A0A075B653 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav16A0A075B653 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav16A0A075B653 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav16A0A075B653 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav16A0A075B653 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav16A0A075B653 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav16A0A075B653 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav16A0A075B653 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav16A0A075B653 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav16A0A075B653 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav16A0A075B653 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav16A0A075B653 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav16A0A075B653 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trav16A0A075B653 Gm27463-201ENSMUST00000183569 57 ntBASIC12.09□□□□□ -0.47
Trav16A0A075B653 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC12.09□□□□□ -0.47
Trav16A0A075B653 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav16A0A075B653 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav16A0A075B653 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trav16A0A075B653 Otx2os1-204ENSMUST00000227221 751 ntBASIC12.09□□□□□ -0.47
Trav16A0A075B653 Odf3b-204ENSMUST00000227834 930 ntBASIC12.09□□□□□ -0.47
Trav16A0A075B653 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trav16A0A075B653 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trav16A0A075B653 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav16A0A075B653 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav16A0A075B653 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav16A0A075B653 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav16A0A075B653 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Trav16A0A075B653 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav16A0A075B653 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav16A0A075B653 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav16A0A075B653 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav16A0A075B653 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav16A0A075B653 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav16A0A075B653 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav16A0A075B653 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16A0A075B653 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16A0A075B653 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav16A0A075B653 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16A0A075B653 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav16A0A075B653 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16A0A075B653 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16A0A075B653 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trav16A0A075B653 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav16A0A075B653 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav16A0A075B653 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16A0A075B653 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav16A0A075B653 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav16A0A075B653 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Trav16A0A075B653 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16A0A075B653 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16A0A075B653 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16A0A075B653 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16A0A075B653 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16A0A075B653 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16A0A075B653 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16A0A075B653 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16A0A075B653 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Trav16A0A075B653 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16A0A075B653 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16A0A075B653 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav16A0A075B653 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16A0A075B653 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16A0A075B653 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav16A0A075B653 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16A0A075B653 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav16A0A075B653 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav16A0A075B653 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav16A0A075B653 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav16A0A075B653 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav16A0A075B653 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Trav16A0A075B653 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav16A0A075B653 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav16A0A075B653 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav16A0A075B653 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav16A0A075B653 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav16A0A075B653 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.07□□□□□ -0.48
Trav16A0A075B653 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms