Protein–RNA interactions for Protein: A0A075B642

Trav10, T cell receptor alpha variable 10 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10A0A075B642 Gm8825-201ENSMUST00000182565 998 ntBASIC13.87□□□□□ -0.19
Trav10A0A075B642 Gm4518-201ENSMUST00000182638 718 ntBASIC13.87□□□□□ -0.19
Trav10A0A075B642 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.87□□□□□ -0.19
Trav10A0A075B642 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.87□□□□□ -0.19
Trav10A0A075B642 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.87□□□□□ -0.19
Trav10A0A075B642 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Trav10A0A075B642 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav10A0A075B642 Gm7506-201ENSMUST00000207758 815 ntBASIC13.87□□□□□ -0.19
Trav10A0A075B642 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav10A0A075B642 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav10A0A075B642 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.87□□□□□ -0.19
Trav10A0A075B642 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.87□□□□□ -0.19
Trav10A0A075B642 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav10A0A075B642 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav10A0A075B642 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav10A0A075B642 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav10A0A075B642 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav10A0A075B642 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav10A0A075B642 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav10A0A075B642 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav10A0A075B642 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav10A0A075B642 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav10A0A075B642 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav10A0A075B642 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav10A0A075B642 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav10A0A075B642 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav10A0A075B642 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav10A0A075B642 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav10A0A075B642 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trav10A0A075B642 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.86□□□□□ -0.19
Trav10A0A075B642 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav10A0A075B642 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav10A0A075B642 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trav10A0A075B642 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.86□□□□□ -0.19
Trav10A0A075B642 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav10A0A075B642 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav10A0A075B642 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav10A0A075B642 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav10A0A075B642 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Trav10A0A075B642 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Trav10A0A075B642 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav10A0A075B642 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC13.86□□□□□ -0.19
Trav10A0A075B642 Gm9172-201ENSMUST00000212092 954 ntBASIC13.86□□□□□ -0.19
Trav10A0A075B642 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav10A0A075B642 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trav10A0A075B642 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav10A0A075B642 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav10A0A075B642 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav10A0A075B642 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav10A0A075B642 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav10A0A075B642 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
Trav10A0A075B642 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav10A0A075B642 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav10A0A075B642 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav10A0A075B642 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav10A0A075B642 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav10A0A075B642 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav10A0A075B642 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav10A0A075B642 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav10A0A075B642 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav10A0A075B642 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav10A0A075B642 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.85□□□□□ -0.19
Trav10A0A075B642 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Trav10A0A075B642 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav10A0A075B642 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav10A0A075B642 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav10A0A075B642 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav10A0A075B642 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav10A0A075B642 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav10A0A075B642 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav10A0A075B642 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav10A0A075B642 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav10A0A075B642 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav10A0A075B642 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav10A0A075B642 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav10A0A075B642 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav10A0A075B642 Gm12644-201ENSMUST00000119935 606 ntBASIC13.85□□□□□ -0.19
Trav10A0A075B642 Gm15372-201ENSMUST00000120729 834 ntBASIC13.85□□□□□ -0.19
Trav10A0A075B642 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav10A0A075B642 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC13.85□□□□□ -0.19
Trav10A0A075B642 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav10A0A075B642 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC13.85□□□□□ -0.19
Trav10A0A075B642 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Trav10A0A075B642 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.85□□□□□ -0.19
Trav10A0A075B642 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav10A0A075B642 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav10A0A075B642 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav10A0A075B642 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Trav10A0A075B642 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav10A0A075B642 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav10A0A075B642 Grk6-207ENSMUST00000225925 2769 ntBASIC13.85□□□□□ -0.19
Trav10A0A075B642 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav10A0A075B642 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav10A0A075B642 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav10A0A075B642 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav10A0A075B642 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trav10A0A075B642 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav10A0A075B642 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trav10A0A075B642 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trav10A0A075B642 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms