Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav16d-dv11A0A075B617 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16d-dv11A0A075B617 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16d-dv11A0A075B617 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16d-dv11A0A075B617 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav16d-dv11A0A075B617 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16d-dv11A0A075B617 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16d-dv11A0A075B617 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16d-dv11A0A075B617 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16d-dv11A0A075B617 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav16d-dv11A0A075B617 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav16d-dv11A0A075B617 Gm13186-201ENSMUST00000118031 316 ntBASIC11.51□□□□□ -0.57
Trav16d-dv11A0A075B617 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16d-dv11A0A075B617 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC11.51□□□□□ -0.57
Trav16d-dv11A0A075B617 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC11.51□□□□□ -0.57
Trav16d-dv11A0A075B617 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC11.51□□□□□ -0.57
Trav16d-dv11A0A075B617 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16d-dv11A0A075B617 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16d-dv11A0A075B617 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Trav16d-dv11A0A075B617 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16d-dv11A0A075B617 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16d-dv11A0A075B617 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav16d-dv11A0A075B617 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16d-dv11A0A075B617 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16d-dv11A0A075B617 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16d-dv11A0A075B617 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav16d-dv11A0A075B617 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav16d-dv11A0A075B617 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav16d-dv11A0A075B617 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav16d-dv11A0A075B617 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16d-dv11A0A075B617 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16d-dv11A0A075B617 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16d-dv11A0A075B617 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16d-dv11A0A075B617 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC11.5□□□□□ -0.57
Trav16d-dv11A0A075B617 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16d-dv11A0A075B617 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16d-dv11A0A075B617 Gm9768-201ENSMUST00000206007 2861 ntBASIC11.5□□□□□ -0.57
Trav16d-dv11A0A075B617 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16d-dv11A0A075B617 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trav16d-dv11A0A075B617 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16d-dv11A0A075B617 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16d-dv11A0A075B617 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16d-dv11A0A075B617 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16d-dv11A0A075B617 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16d-dv11A0A075B617 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16d-dv11A0A075B617 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC11.5□□□□□ -0.57
Trav16d-dv11A0A075B617 Gm12085-201ENSMUST00000119263 940 ntBASIC11.5□□□□□ -0.57
Trav16d-dv11A0A075B617 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16d-dv11A0A075B617 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC11.5□□□□□ -0.57
Trav16d-dv11A0A075B617 Gm26571-201ENSMUST00000181399 666 ntBASIC11.5□□□□□ -0.57
Trav16d-dv11A0A075B617 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trav16d-dv11A0A075B617 Gm18115-201ENSMUST00000221209 621 ntBASIC11.5□□□□□ -0.57
Trav16d-dv11A0A075B617 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16d-dv11A0A075B617 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16d-dv11A0A075B617 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
Trav16d-dv11A0A075B617 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16d-dv11A0A075B617 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16d-dv11A0A075B617 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trav16d-dv11A0A075B617 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16d-dv11A0A075B617 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16d-dv11A0A075B617 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16d-dv11A0A075B617 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16d-dv11A0A075B617 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16d-dv11A0A075B617 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16d-dv11A0A075B617 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16d-dv11A0A075B617 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16d-dv11A0A075B617 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16d-dv11A0A075B617 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16d-dv11A0A075B617 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16d-dv11A0A075B617 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav16d-dv11A0A075B617 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav16d-dv11A0A075B617 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trav16d-dv11A0A075B617 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16d-dv11A0A075B617 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16d-dv11A0A075B617 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trav16d-dv11A0A075B617 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16d-dv11A0A075B617 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16d-dv11A0A075B617 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16d-dv11A0A075B617 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16d-dv11A0A075B617 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16d-dv11A0A075B617 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC11.49□□□□□ -0.57
Trav16d-dv11A0A075B617 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16d-dv11A0A075B617 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16d-dv11A0A075B617 Gm38027-201ENSMUST00000192315 235 ntBASIC11.49□□□□□ -0.57
Trav16d-dv11A0A075B617 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC11.49□□□□□ -0.57
Trav16d-dv11A0A075B617 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16d-dv11A0A075B617 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16d-dv11A0A075B617 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16d-dv11A0A075B617 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16d-dv11A0A075B617 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16d-dv11A0A075B617 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trav16d-dv11A0A075B617 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16d-dv11A0A075B617 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16d-dv11A0A075B617 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16d-dv11A0A075B617 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav16d-dv11A0A075B617 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav16d-dv11A0A075B617 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16d-dv11A0A075B617 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav16d-dv11A0A075B617 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16d-dv11A0A075B617 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms