Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC16.17■□□□□ 0.18
Smarcb1Q9Z0H3 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcb1Q9Z0H3 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcb1Q9Z0H3 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Smarcb1Q9Z0H3 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcb1Q9Z0H3 Gm27397-201ENSMUST00000184997 107 ntBASIC16.17■□□□□ 0.18
Smarcb1Q9Z0H3 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Smarcb1Q9Z0H3 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcb1Q9Z0H3 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.17■□□□□ 0.18
Smarcb1Q9Z0H3 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcb1Q9Z0H3 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcb1Q9Z0H3 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcb1Q9Z0H3 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcb1Q9Z0H3 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcb1Q9Z0H3 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcb1Q9Z0H3 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcb1Q9Z0H3 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcb1Q9Z0H3 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcb1Q9Z0H3 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcb1Q9Z0H3 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.17■□□□□ 0.18
Smarcb1Q9Z0H3 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcb1Q9Z0H3 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcb1Q9Z0H3 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcb1Q9Z0H3 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcb1Q9Z0H3 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcb1Q9Z0H3 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcb1Q9Z0H3 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcb1Q9Z0H3 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.16■□□□□ 0.18
Smarcb1Q9Z0H3 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.16■□□□□ 0.18
Smarcb1Q9Z0H3 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcb1Q9Z0H3 Gm8318-201ENSMUST00000182954 872 ntBASIC16.16■□□□□ 0.18
Smarcb1Q9Z0H3 Gm27702-201ENSMUST00000184512 56 ntBASIC16.16■□□□□ 0.18
Smarcb1Q9Z0H3 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC16.16■□□□□ 0.18
Smarcb1Q9Z0H3 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC16.16■□□□□ 0.18
Smarcb1Q9Z0H3 Gm7229-201ENSMUST00000214719 1007 ntBASIC16.16■□□□□ 0.18
Smarcb1Q9Z0H3 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.16■□□□□ 0.18
Smarcb1Q9Z0H3 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.16■□□□□ 0.18
Smarcb1Q9Z0H3 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcb1Q9Z0H3 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcb1Q9Z0H3 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcb1Q9Z0H3 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcb1Q9Z0H3 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcb1Q9Z0H3 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Smarcb1Q9Z0H3 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcb1Q9Z0H3 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Smarcb1Q9Z0H3 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcb1Q9Z0H3 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcb1Q9Z0H3 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcb1Q9Z0H3 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcb1Q9Z0H3 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Smarcb1Q9Z0H3 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smarcb1Q9Z0H3 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smarcb1Q9Z0H3 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC16.15■□□□□ 0.18
Smarcb1Q9Z0H3 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smarcb1Q9Z0H3 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.15■□□□□ 0.18
Smarcb1Q9Z0H3 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smarcb1Q9Z0H3 Mir7036b-201ENSMUST00000184791 63 ntBASIC16.15■□□□□ 0.18
Smarcb1Q9Z0H3 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC16.15■□□□□ 0.18
Smarcb1Q9Z0H3 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smarcb1Q9Z0H3 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.15■□□□□ 0.18
Smarcb1Q9Z0H3 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smarcb1Q9Z0H3 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Smarcb1Q9Z0H3 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smarcb1Q9Z0H3 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Smarcb1Q9Z0H3 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smarcb1Q9Z0H3 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Smarcb1Q9Z0H3 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smarcb1Q9Z0H3 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Smarcb1Q9Z0H3 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smarcb1Q9Z0H3 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smarcb1Q9Z0H3 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smarcb1Q9Z0H3 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Smarcb1Q9Z0H3 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.14■□□□□ 0.17
Smarcb1Q9Z0H3 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Smarcb1Q9Z0H3 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcb1Q9Z0H3 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcb1Q9Z0H3 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcb1Q9Z0H3 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcb1Q9Z0H3 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcb1Q9Z0H3 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcb1Q9Z0H3 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcb1Q9Z0H3 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcb1Q9Z0H3 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcb1Q9Z0H3 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC16.14■□□□□ 0.17
Smarcb1Q9Z0H3 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
Smarcb1Q9Z0H3 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcb1Q9Z0H3 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcb1Q9Z0H3 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcb1Q9Z0H3 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcb1Q9Z0H3 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcb1Q9Z0H3 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcb1Q9Z0H3 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcb1Q9Z0H3 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcb1Q9Z0H3 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcb1Q9Z0H3 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcb1Q9Z0H3 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Smarcb1Q9Z0H3 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smarcb1Q9Z0H3 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Smarcb1Q9Z0H3 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Smarcb1Q9Z0H3 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms